1. Installation

1. Installation

Note: we do not guarantee that these instructions will work on all operating systems.

General installation instructions

1. Download and install Anaconda or Miniconda

2. Via the command line/terminal, navigate to the folder you wish to install TALLSorts and execute

   git clone https://github.com/Oshlack/ALLSorts.git or git clone git@github.com:Oshlack/ALLSorts.git

   (Alternatively, you can use GitHub to directly download the files in a .zip. Extract these files in a folder of your choosing.)

3. In the folder containing TALLSorts (you should see an env folder in there), create a new environment by executing

   conda env create -f env/tallsorts.yml

   This will create a new conda environment called tallsortsenv.

4. Depending on your conda version, activate this environment using either

   conda activate tallsortsenv or source activate tallsortsenv

5. Install TALLSorts by executing

   pip install .

Run a test!

To ensure your installation works nicely, you should run a test.