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PTB-MR · Jan 15, 2025 · 87802bf · 87802bf
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Showing 3 changed files with 10 additions and 7 deletions.
diff --git a/docs/source/conf.py b/docs/source/conf.py
@@ -106,7 +106,7 @@
 linkcode_blob = html_context['github_version']
 linkcode_link_text = '[source]'
 default_role = 'py:obj'
-
+pygments_style = 'default'
 
 def get_lambda_source(obj):
     """Convert lambda to source code."""
@@ -285,6 +285,9 @@ def sync_notebooks(source_folder, dest_folder):
             else:
                 print(f'Existing {dest_file}. Skipping execution.')
                 mode = 'off'
+            if os.environ.get('NORUN') == '1':
+                print("NORUN: Skipping execution.")
+                mode = 'off'
             content = nbformat.read(dest_file, as_version=nbformat.NO_CONVERT)
             content.metadata['mystnb'] = {'execution_mode': mode}
             nbformat.write(content, dest_file)

diff --git a/examples/notebooks/cartesian_reconstruction.ipynb b/examples/notebooks/cartesian_reconstruction.ipynb
@@ -767,16 +767,16 @@
     "    n_iterations=8,\n",
     ")\n",
     "idat_us_sense = sense_recon_us(kdata_us)\n",
-    "show_images(idat_us.rss().squeeze(), idat_us_sense.rss().squeeze(), titles=['Direct Reconstruction', 'Iterative SENSE'])"
+    "show_images(idat_us_sense.rss().squeeze(), titles=['Iterative SENSE'])"
    ]
   },
   {
    "cell_type": "markdown",
    "id": "53",
    "metadata": {},
    "source": [
-    "More information about the iterative SENSE reconstruction and its implementation in MRpro can be found in the examples\n",
-    "<project:iterative_sense_reconstruction_radial2D.ipynb> and\n",
+    "This looks better! More information about the iterative SENSE reconstruction and its implementation in MRpro\n",
+    "can be found in the examples <project:iterative_sense_reconstruction_radial2D.ipynb> and\n",
     "<project:iterative_sense_reconstruction_with_regularization.ipynb>."
    ]
   }

diff --git a/examples/scripts/cartesian_reconstruction.py b/examples/scripts/cartesian_reconstruction.py
@@ -386,8 +386,8 @@ def show_images(*images: torch.Tensor, titles: list[str] | None = None) -> None:
     n_iterations=8,
 )
 idat_us_sense = sense_recon_us(kdata_us)
-show_images(idat_us.rss().squeeze(), idat_us_sense.rss().squeeze(), titles=['Direct Reconstruction', 'Iterative SENSE'])
+show_images(idat_us_sense.rss().squeeze(), titles=['Iterative SENSE'])
 # %% [markdown]
-# More information about the iterative SENSE reconstruction and its implementation in MRpro can be found in the examples
-# <project:iterative_sense_reconstruction_radial2D.ipynb> and
+# This looks better! More information about the iterative SENSE reconstruction and its implementation in MRpro
+# can be found in the examples <project:iterative_sense_reconstruction_radial2D.ipynb> and
 # <project:iterative_sense_reconstruction_with_regularization.ipynb>.