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Removed deprecated files and Updated docs #78

Merged
merged 103 commits into from
Jul 28, 2022
Merged

Removed deprecated files and Updated docs #78

merged 103 commits into from
Jul 28, 2022

Commits on Jul 19, 2022

  1. removed adaptive.bin.2 files

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  2. removed cdf.to.ftr files

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  3. removed draw.cfd.2d files

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  4. removed draw.txt.2d files

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  5. removed eic.disect files

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  6. removed EIC.plot.learn files

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  7. removed EIC.plot files

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  8. removed eic.pred files

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  9. removed eic.qual files

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  10. removed learn.cdf files

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  11. removed present.cdf.3d files and prof.Rd file

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  12. removed proc.txt files

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  13. removed semi.sup.learn files

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  14. removed target.search files

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  15. again added prof.Rd file

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Commits on Jul 20, 2022

  1. added export stmt to currently exported func

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Commits on Jul 21, 2022

  1. updated func calls with explicit calls

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Commits on Jul 22, 2022

  1. added export for augment_with_known_features

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  2. Merge branch 'RECETOX:master' into update-doc-depre-files

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  3. added example for adjust.time

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  4. added example for adaptive.bin

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  5. added example for combine.seq.3

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  6. added example for cont.index

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  7. upated example for feature.align and adjust.time

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  8. added example for find.match

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  9. added example for find.tol

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  10. added example for find.tol.time

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  11. added example for find.turn.point

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  12. added example for hybrid

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  13. added example for interpol.area

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  14. added example for load.lcms

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  15. added example for mass.match

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  16. added example for peak.characterize

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  17. added example for proc.cdf

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  18. added example for prof.to.features

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  19. added example for recover.weaker

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  20. added example for rm.ridge

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  21. added example for semi.sup

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  22. added example for two.step.hybrid

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  23. added example for unsupervised

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Commits on Jul 24, 2022

  1. added param stmt for adjust.time

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  2. added title and description for adjust.time

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  3. added param and return stmt for feature.align

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  4. added title and description for feature.align

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  5. added param and return stmt for prof.to.features

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  6. added title and description for prof.to.features

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  7. added return for adjust.time

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  8. added title and description for recover.weaker

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  9. added param and return stmt for recover.weaker

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Commits on Jul 25, 2022

  1. added param and return stmt for two.step.hybrid

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  2. added title and description for two.step.hybrid

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  3. added param stmt for unsupervised

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  4. added title for unsupervised

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  5. added title and description for semi.sup

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  6. added param and return stmt for semi.sup

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  7. added title and description for adaptive.bin

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  8. added param and return stmt for adaptive.bin

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  9. added param stmt for combine.seq.3

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  10. added param and return stmt for cont.index

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  11. added title and description for find.match

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  12. added param and return stmt for find.match

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  13. added title and description for find.tol

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  14. added param and return stmt for find.tol

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  15. added title and description for find.tol.time

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  16. added param stmt for find.tol.time

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  17. added title and description for find.turn.point

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  18. added param and return stmt for find.turn.point

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  19. added param and title stmt for hybrid

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  20. added title and description for interpol.area

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  21. added param and return stmt for interpol.area

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  22. added title and description for load.lcms

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  23. added param and return stmt for load.lcms

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  24. added title and description for peak.characterize

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  25. added param and return stmt for peak.characterize

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  26. added title and description for proc.cdf

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  27. added param and return stmt for proc.cdf

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  28. added title and description for rm.ridge

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  29. added param and return stmt for rm.ridge

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Commits on Jul 26, 2022

  1. updated param stmt for prof.to.features

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  2. added param and title stmt for extract_features

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  3. added example for extract_features

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Commits on Jul 27, 2022

  1. updated adaptive.bin.Rd

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  2. updated combine.seq.3 with return

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  3. updated adjust.time and Rd file

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  4. updated cont.index.Rd file

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  5. updated param for feature.align

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  6. updated return for feature.align and Rd file

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  7. added return for find.tol.time and Rd file

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  8. updated param and some typos for hybrid and Rd file

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  9. updated param for proc.cdf.Rd

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  10. updated param for prof.to.features and Rd file

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  11. fixed typos for semi.sup and two.step.hybrid

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  12. updated recover.weaker.Rd

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  13. fixed typos in rm.ridge.Rd

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  14. updated param in semi.sup.Rd

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  15. updated param and fixed typos in two.step.hybrid

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  16. added description for extract_features

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  17. updated param and fixed typos in unsupervised

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Commits on Jul 28, 2022

  1. Update R/feature.align.R

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  2. Update R/find.tol.time.R

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  3. removed call to present.cdf.3d in prof.Rd

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  4. Update mass.match.R

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  5. Merge branch 'update-doc-depre-files' of https://github.com/zargham-a… 

    …hmad/recetox-aplcms into update-doc-depre-files
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