Merge pull request #167 from SysBioChalmers/fix/model_id

fix: remove dash from model ID while exporting to SMBL format
SysBioChalmers · Apr 22, 2020 · 9752326 · 9752326
2 parents 4c06e56 + 250757b
commit 9752326
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/code/io/exportHumanGEM.m b/code/io/exportHumanGEM.m
@@ -109,6 +109,7 @@
     model = simplifyModel(ihuman,false,false,true);  % remove inactivated rxns
     model = annotateModel(model);  % add annotation data to structure
     model = rmfield(model,'inchis');  % temporarily remove inchis until export function is updated
+    model.id = regexprep(model.id,'-','');  % remove dash from model ID since it causes problems with SBML I/O
     exportModel(model,fullfile(path,'modelFiles','xml',strcat(prefix,'.xml')));
 end