Reduce viral load testing for PLHIV on ART #2676
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| name: Run extra tests on issue or pull-request comments | |
| on: | |
| issue_comment: | |
| types: | |
| - created | |
| jobs: | |
| scaled_sim: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: scaled-sim | |
| commands: tox -v -e profile | |
| description: Profiled scale run of model | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| multiple_seed_tests: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: multiple-seed-tests | |
| commands: | | |
| tox -v -e py311,report -- pytest --seed 2671936806 3512589365 --cov --cov-report=term-missing -vv tests | |
| description: Run of tests over multiple seeds | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| python311_pandas15_fast_tests: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: python3.11-pandas1.5-fast-tests | |
| commands: | | |
| tox -v -e py311-pandas15,report -- pytest --skip-slow --cov --cov-report=term-missing -vv tests | |
| description: Run of fast tests on Python v3.11 with Pandas v1.5 | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| python311_pandas15_all_tests: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: python3.11-pandas1.5-all-tests | |
| commands: | | |
| tox -v -e py311-pandas15,report -- pytest --cov --cov-report=term-missing -vv tests | |
| description: Run of all tests on Python v3.11 with Pandas v1.5 | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| python311_pandas20_fast_tests: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: python3.11-pandas2.0-fast-tests | |
| commands: | | |
| tox -v -e py311-pandas20,report -- pytest --skip-slow --cov --cov-report=term-missing -vv tests | |
| description: Run of fast tests on Python v3.11 with Pandas v2.0 | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| python311_pandas20_all_tests: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: python3.11-pandas2.0-all-tests | |
| commands: | | |
| tox -v -e py311-pandas20,report -- pytest --cov --cov-report=term-missing -vv tests | |
| description: Run of all tests on Python v3.11 with Pandas v2.0 | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| python311_pandas21_fast_tests: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: python3.11-pandas2.1-fast-tests | |
| commands: | | |
| tox -v -e py311-pandas21,report -- pytest --skip-slow --cov --cov-report=term-missing -vv tests | |
| description: Run of fast tests on Python v3.11 with Pandas v2.1 | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| python311_pandas21_all_tests: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: python3.11-pandas2.1-all-tests | |
| commands: | | |
| tox -v -e py311-pandas21,report -- pytest --cov --cov-report=term-missing -vv tests | |
| description: Run of all tests on Python v3.11 with Pandas v2.1 | |
| timeout-minutes: 8640 | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} | |
| dummy_job: | |
| uses: ./.github/workflows/run-on-comment.yml | |
| with: | |
| runs-on: '["self-hosted", "test"]' | |
| keyword: dummy-job | |
| commands: 'true' | |
| description: Dummy job for testing workflow | |
| application-organization: UCL | |
| secrets: | |
| application-id: ${{ secrets.COMMENT_BOT_APP_ID }} | |
| application-private-key: ${{ secrets.COMMENT_BOT_APP_PRIVATE_KEY }} |