remove references to ResourceFile_HIV.xlsx

UCL · Dec 17, 2024 · 3a9988a · 3a9988a
1 parent 1e165d9
commit 3a9988a
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Showing 8 changed files with 5 additions and 1,076 deletions.
diff --git a/resources/ResourceFile_HIV.xlsx b/resources/ResourceFile_HIV.xlsx
diff --git a/resources/~$ResourceFile_HIV.xlsx b/resources/~$ResourceFile_HIV.xlsx
diff --git a/src/scripts/hiv/projections_jan2023/calibration_script.py b/src/scripts/hiv/projections_jan2023/calibration_script.py
@@ -69,7 +69,7 @@ def __init__(self):
         self.runs_per_draw = runs_per_draw
 
         self.sampled_parameters = pd.read_excel(
-            os.path.join(self.resources, "../../../../resources/ResourceFile_HIV.xlsx"),
+            os.path.join(self.resources, "../../../../resources/ResourceFile_HIV/parameters.csv"),
             sheet_name="LHC_samples",
         )
 

diff --git a/src/scripts/hiv/projections_jan2023/output_plots.py b/src/scripts/hiv/projections_jan2023/output_plots.py
@@ -90,7 +90,7 @@ def make_plot(model=None, data_mid=None, data_low=None, data_high=None, title_st
 data_tb_ntp = data_tb_ntp.drop(columns=["year"])
 
 # HIV resourcefile
-xls = pd.ExcelFile(resourcefilepath / "ResourceFile_HIV.xlsx")
+xls = pd.ExcelFile(resourcefilepath / "ResourceFile_HIV/parameters.csv")
 
 # HIV UNAIDS data
 data_hiv_unaids = pd.read_excel(xls, sheet_name="unaids_infections_art2021")