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26 Open 15 Closed
26 Open 15 Closed
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Issues list

Dependency 'bold' not available
#46 opened Oct 7, 2024 by Lothyrden
2
Error in list[[k]][start:end, 2:5] : subscript out of bounds
#44 opened Aug 11, 2024 by z-pyyyy
Error in rawToChar(res$content) : long vectors not supported yet: raw.c:68
#43 opened Jan 25, 2024 by YechengWu1123
Error in read.fasta(readin[k], as.string = T) : no line starting with a > character found
#42 opened Dec 24, 2023 by YechengWu1123
2
PrimerMiner
#41 opened Aug 17, 2022 by Saleh-Aljaafari
1
not available for this version of R
#40 opened Feb 14, 2022 by babinecha
6
plot_alignment step restrictions
#39 opened May 20, 2021 by ucbtmae
@VascoElbrecht
1
Can't make plots from lower case fasta files bug
#38 opened Apr 27, 2021 by VascoElbrecht
@VascoElbrecht
update error matching enhancement
#36 opened Sep 11, 2020 by VascoElbrecht
@VascoElbrecht
Some errors when trying to batch download with 12S and 16S markers
#34 opened Apr 17, 2019 by ucbtmae
2
Error installing JAMP locally
#33 opened Mar 5, 2019 by LarrainK
1
check how gaps are handled with ribosomal alignments enhancement
#31 opened Jan 25, 2018 by VascoElbrecht
@VascoElbrecht
Add maximum sequence number to download! enhancement
#30 opened Jan 25, 2018 by VascoElbrecht
@VascoElbrecht
0.3 bases enhancement
#29 opened Jan 24, 2018 by VascoElbrecht
@VascoElbrecht
auto delete folders when downloading failed because of server error enhancement
#23 opened Sep 1, 2016 by VascoElbrecht
@VascoElbrecht
1
Compare each sequence against a mitochondrial reference before clustering and verify that primers are trimmed with BOLD api enhancement
#22 opened Aug 31, 2016 by VascoElbrecht
@VascoElbrecht
add an option to include custom data into the clustering process enhancement
#21 opened Aug 12, 2016 by VascoElbrecht
@VascoElbrecht
1
Check version in config file against installed PrimerMiner file enhancement
#20 opened Aug 12, 2016 by VascoElbrecht
@VascoElbrecht
Add dependencies to package so they are automatically installed enhancement
#19 opened Aug 10, 2016 by VascoElbrecht
@VascoElbrecht
1
BOLD database - support plant / fungi markers enhancement
#17 opened Aug 10, 2016 by VascoElbrecht
@VascoElbrecht
automatcally cluster mitogenomes as well, to provide a backbone to map agains enhancement
#15 opened Apr 8, 2016 by VascoElbrecht
@VascoElbrecht
batch download - unknown error bug
#13 opened Apr 4, 2016 by VascoElbrecht
@VascoElbrecht
4
Prevent Vsearch from writing lower characters enhancement
#8 opened Apr 3, 2016 by VascoElbrecht
@VascoElbrecht
speed up writing OTU consensus sequences in the batch_download comand enhancement
#4 opened Apr 1, 2016 by VascoElbrecht
@VascoElbrecht
1
plot_alignments crashes when only plotting one fasta file enhancement
#3 opened Apr 1, 2016 by VascoElbrecht
@VascoElbrecht
1
ProTip! Exclude everything labeled bug with -label:bug.