dpclust3p v1.0.8

• Added more example pipelines in inst/example/
• Added README
• Added function to create DPClust master file
• Various small bugfixes and extensions
• Code cleanup
• Extended documentation
• Dockerfile added

dpclust3p v1.0.7

• Fixed bug in Kataegis code
• Added support for Strelka and cgpPindel indels
• Cleanup of documentation for Roxygen
• Updates to copy number collation code
• Speed improvement when obtaining alt allele from a VCF object

dpclust3p v1.0.6

• Added standard figures into the qualitycontrol script
• Moved allele counters into separate script
• Catch case when no SNVs with copy number
• Handle missing values when collating BB profile

dpclust3p v1.0.5

• extended kataegis screening and indel filtering

dpclust3p v1.0.4

Merge pull request #2 from sdentro/dev

Sorting output and split BB X/Y chromosome call for males

dpclust3p v1.0.3

Adding processing of copy number code
Bugfix in determining whether an SNV is subclonal

dpclust3p v1.0.1

Merge pull request #1 from sdentro/dev

Merging v1.0.1

dpclust3p v1.0.0

dpclust3p-v1.0.0

Updating docs