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Fix gelu to use erf based algorithm #18827

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merged 1 commit into from
Jul 31, 2020
Merged

Fix gelu to use erf based algorithm #18827

merged 1 commit into from
Jul 31, 2020

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TaoLv
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@TaoLv TaoLv commented Jul 30, 2020

Description

(Brief description on what this PR is about)

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Essentials

Please feel free to remove inapplicable items for your PR.

  • The PR title starts with [MXNET-$JIRA_ID], where $JIRA_ID refers to the relevant JIRA issue created (except PRs with tiny changes)
  • Changes are complete (i.e. I finished coding on this PR)
  • All changes have test coverage:
  • Unit tests are added for small changes to verify correctness (e.g. adding a new operator)
  • Nightly tests are added for complicated/long-running ones (e.g. changing distributed kvstore)
  • Build tests will be added for build configuration changes (e.g. adding a new build option with NCCL)
  • Code is well-documented:
  • For user-facing API changes, API doc string has been updated.
  • For new C++ functions in header files, their functionalities and arguments are documented.
  • For new examples, README.md is added to explain the what the example does, the source of the dataset, expected performance on test set and reference to the original paper if applicable
  • Check the API doc at https://mxnet-ci-doc.s3-accelerate.dualstack.amazonaws.com/PR-$PR_ID/$BUILD_ID/index.html
  • To the best of my knowledge, examples are either not affected by this change, or have been fixed to be compatible with this change

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  • Feature1, tests, (and when applicable, API doc)
  • Feature2, tests, (and when applicable, API doc)

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  • If this change is a backward incompatible change, why must this change be made.
  • Interesting edge cases to note here

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Hey @TaoLv , Thanks for submitting the PR
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TaoLv commented Jul 30, 2020

FYI, @sxjscience @zheyuye .

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is erf based implementation slower?

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szha commented Jul 31, 2020

@mxnet-bot run ci [unix-cpu]

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Jenkins CI successfully triggered : [unix-cpu]

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TaoLv commented Jul 31, 2020

is erf based implementation slower?

They should be similar in the library.

@szha szha merged commit 08a5ee3 into apache:master Jul 31, 2020
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szha commented Jul 31, 2020

thanks for the patch

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TaoLv commented Aug 1, 2020

Thanks for the merge. Please let me know if this is needed for any other branch.

zheyuye added a commit to zheyuye/incubator-mxnet that referenced this pull request Aug 5, 2020
commit 0f65ef6
Author: Xi Wang <xidulu@gmail.com>
Date:   Wed Aug 5 10:48:50 2020 +0800

    nb fix (apache#18858)

commit 7b7cef5
Author: Serge Panev <spanev@nvidia.com>
Date:   Tue Aug 4 18:23:48 2020 -0700

     MXNet-TRT: Add PrePartition param caching - move init_tensorrt_params logic  (apache#18490)

    * Update to TRT 7 API

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Add PrePartition param caching - move init_tensorrt_params logic

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Handle node with no defined input

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Remove tmp comment

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit 59e200a
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Tue Aug 4 17:01:23 2020 -0700

    fix nn.dense doc (apache#18830)

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit 2e97226
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Aug 4 21:11:32 2020 +0000

    Fix edge case when casting gluon Block before export (apache#18853)

    * Fix edge case when casting gluon Block before export

    Fixes apache#18843

    * Fix gpu test

commit b8eccc8
Author: Yang Shi <yangshia@amazon.com>
Date:   Tue Aug 4 14:08:09 2020 -0700

    fix set default website version rewrite rule for cdn (apache#18856)

commit 7a40219
Author: Serge Panev <spanev@nvidia.com>
Date:   Tue Aug 4 10:34:21 2020 -0700

    Remove check for subgraph with cycles (apache#18555)

    * Remove check for subgraph with cycles

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Add comments

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit 95fa63f
Author: Serge Panev <spanev@nvidia.com>
Date:   Mon Aug 3 17:15:02 2020 -0700

    Update the onnx-tensorrt submodule - CI to TRT7 (apache#18574)

commit 7f2e314
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Mon Aug 3 16:09:48 2020 -0700

    update setup.py (apache#18850)

    * update setup.py

    * update python version

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit f872b43
Author: Leonard Lausen <lausen@amazon.com>
Date:   Mon Aug 3 20:11:06 2020 +0000

    Protobuf_USE_STATIC_LIBS must be set on Apple too (apache#18851)

    Fixes apache#18840

commit 4bb8224
Author: Yang Shi <yangshia@amazon.com>
Date:   Mon Aug 3 12:30:13 2020 -0700

    Fixed python website double scroller and improve UX (apache#18845)

    * make python site header scroll aware and avoid double scroller

    * add compiled assets

    * adjust python site second header height

    * add new line

    * set focus to main content on DOM load

commit 7a5a488
Author: Iblis Lin <iblis@hs.ntnu.edu.tw>
Date:   Tue Aug 4 03:28:08 2020 +0800

    Fix broken link in docs/README.md (apache#18847)

commit 534cdbc
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Aug 3 11:58:33 2020 -0700

    Create greetings.yml (apache#18842)

commit 9fd2cce
Author: kpuatamazon <56725192+kpuatamazon@users.noreply.github.com>
Date:   Mon Aug 3 17:40:44 2020 +0100

    Update tests/README.md Docker instructions to match ci/README.md (apache#18848)

    Documentation was missing python3-docker and had an outdated platform.

commit 54b9e9c
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Aug 3 08:59:33 2020 -0700

    remove unnecessary usage of pretrained models, and prefer smaller size (apache#18844)

commit 51340d8
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Sat Aug 1 16:23:03 2020 -0700

    Add compiled_with_cxx11_abi API  (apache#18836)

    * draft

    * add impl

    * add test

    * set default val

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-42-138.ec2.internal>

commit 5a22193
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Fri Jul 31 17:06:17 2020 -0700

    [NumPy] allow mixed array types (apache#18562)

    * allow mixed types in array func protocol

    * fix apache#18746

    * add support for memory share check

commit 08a5ee3
Author: Tao Lv <tao.a.lv@intel.com>
Date:   Sat Aug 1 03:38:20 2020 +0800

    fix gelu to use erf based algorithm (apache#18827)

commit ac36089
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Jul 31 04:54:10 2020 +0000

    Fixup move gluon.metric api docs (apache#18748)

    * Fix metric API page

    * Update index.rst

commit 7a24006
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Jul 31 02:58:55 2020 +0000

    Enable DIST_KVSTORE by default in staticbuild (apache#18796)

    * Enable DIST_KVSTORE by default in staticbuild

    set(USE_DIST_KVSTORE ON CACHE BOOL "Build with DIST_KVSTORE support")

    * Ensure static linkage of dependencies

    * Fix for OS X

    * Fix shell syntax

    * Alternate approach to force static linkage of libprotobuf

commit aa53291
Author: Yang Shi <yangshia@amazon.com>
Date:   Thu Jul 30 19:53:27 2020 -0700

    add adaptive left margin for python site document body (apache#18828)

commit 045efb2
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Thu Jul 30 19:19:33 2020 -0700

    [NumPy] DLPack refactor and npx.from_numpy (apache#18656)

    * refactor dlpack and add from_numpy to npx

    * remove reference of DeepNumPy

    * map platform-dependent types to fixed-size types

    * update DMLC_LOG_FATAL_THROW

    * fix flaky

    * fix flaky

    * test no error

commit 608afef
Author: Xi Wang <xidulu@gmail.com>
Date:   Fri Jul 31 02:30:25 2020 +0800

    Fix dirichlet flaky tests (apache#18817)

    * make parameter smoother

    * minor changes

commit 6bbd531
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Jul 29 20:31:19 2020 +0000

    Update clang-tidy integration (apache#18815)

    Run clang-tidy via cmake only on the code managed by mxnet (and not 3rdparty dependencies), update to clang-tidy-10 and run clang-tidy-10 -fix to fix all the warnings that are enforced on CI.

    Developers can run clang-tidy by specifying the -DCMAKE_CXX_CLANG_TIDY="clang-tidy-10" to cmake, or using the python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh build_ubuntu_cpu_clang_tidy script.

commit b685fad
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 12:22:12 2020 -0700

    use regex that is supported by all browsers (apache#18811)

commit 9308aca
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 12:21:42 2020 -0700

    remove other language bindings section from website api page (apache#18783)

    * remove other language bindings section from api page

    * remove language binding docs redirect

    * add call for contribution banner

    * modify call for contribution wording

    Co-authored-by: Aaron Markham <markhama@amazon.com>

    * more wording modification

    Co-authored-by: Aaron Markham <markhama@amazon.com>

    * add hyperlink to 1.x version in banner

    * add reference to the C api deprecation github issue

    Co-authored-by: Aaron Markham <markhama@amazon.com>

commit 915f6b4
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 11:28:37 2020 -0700

    Remove deepnumpy reference and move Numpy tutorials to top level (apache#18798)

    * move np tutorials to top level

    * replace deepnumpy reference to np

    * add info in card

    * remove useless entry

    * replace NDArray API card with np.ndarray

    * python site refactor

    * remove duplicated drawer and refactor layout

    * extend document width to 100% for xl devices

commit e9829e7
Author: Joe Evans <github@250hacks.net>
Date:   Tue Jul 28 18:53:29 2020 -0700

    Cherry-pick large tensor support from apache#18752. (apache#18804)

    Co-authored-by: Joe Evans <joeev@amazon.com>

commit 126636c
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Jul 28 22:11:20 2020 +0000

    Fix naming in runtime_functions.sh (apache#18795)

commit f83dbac
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Tue Jul 28 11:48:05 2020 -0700

    remove executor manager from API doc (apache#18802)

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit 7908d7e
Author: Yiyan66 <57363390+Yiyan66@users.noreply.github.com>
Date:   Tue Jul 28 15:11:19 2020 +0800

    [numpy] fix flaky mixed precision binary error (apache#18660)

    * temp

    * change test

    * fix bad func call

    * test

    * rectify

    * doc

    * change test

commit a807f6d
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Jul 27 22:06:50 2020 -0700

    [NumPy] loss for np array (apache#17196)

    * loss for np/nd array

    * fix flaky

commit 74430a9
Author: phile <phile_999@126.com>
Date:   Tue Jul 28 06:44:54 2020 +0800

    remove NLL in metric (apache#18794)

commit 9e77e81
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Mon Jul 27 14:27:52 2020 -0700

    Update CUB and include it only for CUDA < 11 (apache#18799)

commit 98b3f73
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Sat Jul 25 16:19:36 2020 -0700

    add support for np.ndarray in autograd.function (apache#18790)

commit c1db2d5
Author: Leonard Lausen <lausen@amazon.com>
Date:   Sat Jul 25 16:58:45 2020 +0000

    Remove caffe plugin (apache#18787)

    * Remove caffe plugin

    * Fix

    * Remove CXX14 feature flag

    * Update test

commit 2fbd182
Author: Leonard Lausen <lausen@amazon.com>
Date:   Sat Jul 25 02:48:30 2020 +0000

    Split up CI sanity test functions to enable fine-grained trigger (apache#18786)

    Developers can now trigger fine grained checks:

    python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh sanity_python
    python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh sanity_license
    etc

commit 06b5d22
Author: Serge Panev <spanev@nvidia.com>
Date:   Fri Jul 24 14:22:42 2020 -0700

    ONNX import: use Conv pad attribute for symmetrical padding (apache#18675)

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit e31ad77
Author: Yang Shi <yangshia@amazon.com>
Date:   Thu Jul 23 11:33:31 2020 -0700

    set website default version to current stable (1.6) version (apache#18738)

    * set website default version - test redirect

    * enable first time redirect on all master website pages

    * update test code

    * remove unnecessary test code

    * fix typo

    * delete test code

commit 02ae456
Author: Dick Carter <dick.carter@comcast.net>
Date:   Thu Jul 23 11:17:10 2020 -0700

    Improve environment variable handling in unittests (apache#18424)

    This PR makes it easy to create unittests that require specific settings of environment variables, while avoiding the pitfalls (discussed in comments section). This PR can be considered a recasting and expansion of the great vision of @larroy in creating the EnvManager class in apache#13140.

    In its base form, the facility is a drop-in replacement for EnvManager, and is called 'environment':

    with environment('MXNET_MY_NEW_FEATURE', '1'):
        <test with feature enabled>
    with environment('MXNET_MY_NEW_FEATURE', '0'):
        <test with feature disabled>

    Like EnvManager, this facility takes care of the save/restore of the previous environment variable state, including when exceptions are raised. In addition though, this PR introduces the features:

        A similarly-named unittest decorator: @with_environment(key, value)
        The ability to pass in multiple env vars as a dict (as is needed for some tests) in both forms, so for example:

    with environment({'MXNET_FEATURE_A': '1',
                      'MXNET_FEATURE_B': '1'}):
        <test with both features enabled>

        Works on Windows! This PR includes a wrapping of the backend's setenv() and getenv() functions, and uses this direct access to the backend environment to keep it in sync with the python environment. This works around the problem that the C Runtime on Windows gets a snapshot of the Python environment at startup that is immutable from Python.
        with environment() has a simple implementation using the @contextmanager decorator
        Tests are included that validate the facility works with all combinations of before_val/set_val, namely unset/unset, unset/set, set/unset, set/set.

    There were 5 unittests previously using EnvManager, and this PR shifts those uses to with environment():, while converting over 20 other ad-hoc uses of os.environ[] within the unittests. This PR also enables those unittests that were bypassed on Windows (due to the inability to set environment variables) to run on all platforms.

    Further Comments

    Environment variables are a two-edged sword- they enable useful operating modes for testing, debugging or niche applications, but like all features they must be tested. The correct approach for testing with a particular env var setting is:

    def set_env_var(key, value):
        if value is None:
            os.environ.pop(key, None)
        else:
            os.environ[key] = value

    old_env_var_value = os.environ.get(env_var_name)
    try:
        set_env_var(env_var_name, test_env_var_value)
        <perform test>
    finally:
        set_env_var(env_var_name, old_env_var_value )

    The above code makes no assumption about whether the before-test and within-test state of the env var is set or unset, and restores the prior environment even if the test raises an exception. This represents a lot of boiler-plate code that could be potentially mishandled. The with environment() context makes it simple to handle all this properly. If an entire unittest wants a forced env var setting, then using the @with_environment() decorator avoids the code indent of the with environment() approach if used otherwise within the test.

commit 18af71e
Author: Leonard Lausen <lausen@amazon.com>
Date:   Thu Jul 23 18:09:10 2020 +0000

    CI: Migrate remaining Dockerfiles to docker-compose.yml and remove unused code (apache#18771)

    * Migrate remaining Dockerfiles to docker-compose.yml

    - Delete unused Dockerfiles
    - Delete unused install/*.sh scripts
    - Consolidate ubuntu_gpu_tensorrt and ubuntu_gpu
    - Remove deprecated logic in ci/build.py (no longer needed with
      docker-compose)
    - Remove ci/docker_cache.py (no longer needed with docker-compose)

    * Fix

    * Fix

    * Fix ubuntu_cpu_jekyll

commit 1928117
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Tue Jul 21 23:35:15 2020 -0700

    Fix crash when accessing already destructed static variables (apache#18768)

commit a330a02
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Jul 22 06:31:47 2020 +0000

    Fix mx.symbol.numpy._Symbol.__deepcopy__ logic error (apache#18686)

    * Fix mx.symbol.numpy._Symbol.__deepcopy__ logic error

    Performed shallow copy instead of deep copy

    * Test

    * Fix test

commit 9548b0c
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Jul 21 21:42:01 2020 +0000

    Remove duplicate settings in .codecov.yml (apache#18763)

    New PRs started showing the codecov/project badge again due apparent change in codecov's backend resolving these duplicate options specified in .codecov.yml
@zheyuye zheyuye mentioned this pull request Aug 5, 2020
zheyuye added a commit to zheyuye/incubator-mxnet that referenced this pull request Aug 10, 2020
commit d0e17e5
Author: Ke Han <38852697+hanke580@users.noreply.github.com>
Date:   Mon Aug 10 12:48:56 2020 +0800

    [Numpy] FFI: sort, argsort, vstack etc (apache#17857)

    * * sort FFI

    * * argsort FFI

    * * vstack, row_stack FFI

    * * greater FFI

    * * inner FFI

    * multinomial FFI

    * rand FFI

    * randn FFI

    * * Fix input out of index and rscalar of greater

    * * Fix ndarray situation

    * * Fix sanity

    * fix lint

    * fix bugs

    * * Remove duplicate operator (greater)

    * * Fix Tuple downcast Error (Only Integer)
    * Fix segmentation fault(pointer)

    Co-authored-by: Sheng Zha <zhasheng@amazon.com>

commit 5c50475
Author: Liu, Hao <haoliuhust@hotmail.com>
Date:   Mon Aug 10 08:15:22 2020 +0800

    fix pooling_convention warning when convert model to onnx (apache#18529)

    * fix  pooling_convention warning

    * fix pooling_convention warning

    * fix lint

    Co-authored-by: JackieWu <wkcn@live.cn>

commit d52d9c6
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Sun Aug 9 13:33:03 2020 -0700

    Revert "Add SOVERSION when build shared libmxnet.so library (apache#17815)" (apache#18882)

    This reverts commit d101c3c.

commit 706c369
Author: Ziyue Huang <ziyue@apache.org>
Date:   Sun Aug 9 07:55:16 2020 +0800

    fix trainer when the model involves share_parameters (apache#18880)

    * fix trainer when using shared_param

    * add unittest

commit cf908fd
Author: Xingjian Shi <xshiab@connect.ust.hk>
Date:   Fri Aug 7 19:55:36 2020 -0700

    [Numpy][Bugfix] Add hybridization test to loss layers (apache#18876)

    * Test for hybridization

    * fix typo

    * fix

    * fix test

    * update

    * Update loss.py

    * fix bug of sum

commit d5fdcbf
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Fri Aug 7 18:11:16 2020 -0700

    drop list support for gluon trainer (apache#18877)

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-42-138.ec2.internal>

commit dde635f
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Aug 7 21:16:24 2020 +0000

    Re-enable the linker version scripts for binary distribution (apache#18872)

    * Symbol visibility

    * Fix

commit 1694d2f
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Fri Aug 7 11:21:22 2020 -0700

    [CI] remove data.mxnet.io usage for CI stability (apache#18871)

    * remove duplicate mnist functions

    * remove data.mxnet.io usage in tests

    * add waitall

commit 708a900
Author: Serge Panev <spanev@nvidia.com>
Date:   Fri Aug 7 10:46:22 2020 -0700

    Fix a bug in MXNet-TensorRT (apache#18870)

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit d101c3c
Author: Gustavo Alvarez <462213+sl1pkn07@users.noreply.github.com>
Date:   Fri Aug 7 04:34:51 2020 +0200

    Add SOVERSION when build shared libmxnet.so library (apache#17815)

    https://en.wikipedia.org/wiki/Soname
    https://cmake.org/cmake/help/latest/prop_tgt/SOVERSION.html

    Co-authored-by: Leonard Lausen <lausen@amazon.com>

commit a3eabf0
Author: Leonard Lausen <lausen@amazon.com>
Date:   Thu Aug 6 15:52:52 2020 +0000

    Fix MXLibInfoCompiledWithCXX11ABI (apache#18864)

    * Fix MXLibInfoCompiledWithCXX11ABI

    * Fix test

commit 84f8984
Author: bgawrych <bartlomiej.gawrych@intel.com>
Date:   Thu Aug 6 04:32:39 2020 +0200

    ElementWiseSum fix for oneDNN  (apache#18859)

    * Fix ElementwiseSum for DNNL

    * Add test for oneDNN ElemwiseSum

    Co-authored-by: Bart Gawrych <gawrych.bartlomiej@intel.com>

commit a78f137
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Aug 5 14:24:46 2020 -0700

    improve python api website ux - make toc sticky (apache#18863)

commit 0f65ef6
Author: Xi Wang <xidulu@gmail.com>
Date:   Wed Aug 5 10:48:50 2020 +0800

    nb fix (apache#18858)

commit 7b7cef5
Author: Serge Panev <spanev@nvidia.com>
Date:   Tue Aug 4 18:23:48 2020 -0700

     MXNet-TRT: Add PrePartition param caching - move init_tensorrt_params logic  (apache#18490)

    * Update to TRT 7 API

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Add PrePartition param caching - move init_tensorrt_params logic

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Handle node with no defined input

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Remove tmp comment

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit 59e200a
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Tue Aug 4 17:01:23 2020 -0700

    fix nn.dense doc (apache#18830)

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit 2e97226
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Aug 4 21:11:32 2020 +0000

    Fix edge case when casting gluon Block before export (apache#18853)

    * Fix edge case when casting gluon Block before export

    Fixes apache#18843

    * Fix gpu test

commit b8eccc8
Author: Yang Shi <yangshia@amazon.com>
Date:   Tue Aug 4 14:08:09 2020 -0700

    fix set default website version rewrite rule for cdn (apache#18856)

commit 7a40219
Author: Serge Panev <spanev@nvidia.com>
Date:   Tue Aug 4 10:34:21 2020 -0700

    Remove check for subgraph with cycles (apache#18555)

    * Remove check for subgraph with cycles

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Add comments

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit 95fa63f
Author: Serge Panev <spanev@nvidia.com>
Date:   Mon Aug 3 17:15:02 2020 -0700

    Update the onnx-tensorrt submodule - CI to TRT7 (apache#18574)

commit 7f2e314
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Mon Aug 3 16:09:48 2020 -0700

    update setup.py (apache#18850)

    * update setup.py

    * update python version

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit f872b43
Author: Leonard Lausen <lausen@amazon.com>
Date:   Mon Aug 3 20:11:06 2020 +0000

    Protobuf_USE_STATIC_LIBS must be set on Apple too (apache#18851)

    Fixes apache#18840

commit 4bb8224
Author: Yang Shi <yangshia@amazon.com>
Date:   Mon Aug 3 12:30:13 2020 -0700

    Fixed python website double scroller and improve UX (apache#18845)

    * make python site header scroll aware and avoid double scroller

    * add compiled assets

    * adjust python site second header height

    * add new line

    * set focus to main content on DOM load

commit 7a5a488
Author: Iblis Lin <iblis@hs.ntnu.edu.tw>
Date:   Tue Aug 4 03:28:08 2020 +0800

    Fix broken link in docs/README.md (apache#18847)

commit 534cdbc
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Aug 3 11:58:33 2020 -0700

    Create greetings.yml (apache#18842)

commit 9fd2cce
Author: kpuatamazon <56725192+kpuatamazon@users.noreply.github.com>
Date:   Mon Aug 3 17:40:44 2020 +0100

    Update tests/README.md Docker instructions to match ci/README.md (apache#18848)

    Documentation was missing python3-docker and had an outdated platform.

commit 54b9e9c
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Aug 3 08:59:33 2020 -0700

    remove unnecessary usage of pretrained models, and prefer smaller size (apache#18844)

commit 51340d8
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Sat Aug 1 16:23:03 2020 -0700

    Add compiled_with_cxx11_abi API  (apache#18836)

    * draft

    * add impl

    * add test

    * set default val

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-42-138.ec2.internal>

commit 5a22193
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Fri Jul 31 17:06:17 2020 -0700

    [NumPy] allow mixed array types (apache#18562)

    * allow mixed types in array func protocol

    * fix apache#18746

    * add support for memory share check

commit 08a5ee3
Author: Tao Lv <tao.a.lv@intel.com>
Date:   Sat Aug 1 03:38:20 2020 +0800

    fix gelu to use erf based algorithm (apache#18827)

commit ac36089
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Jul 31 04:54:10 2020 +0000

    Fixup move gluon.metric api docs (apache#18748)

    * Fix metric API page

    * Update index.rst

commit 7a24006
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Jul 31 02:58:55 2020 +0000

    Enable DIST_KVSTORE by default in staticbuild (apache#18796)

    * Enable DIST_KVSTORE by default in staticbuild

    set(USE_DIST_KVSTORE ON CACHE BOOL "Build with DIST_KVSTORE support")

    * Ensure static linkage of dependencies

    * Fix for OS X

    * Fix shell syntax

    * Alternate approach to force static linkage of libprotobuf

commit aa53291
Author: Yang Shi <yangshia@amazon.com>
Date:   Thu Jul 30 19:53:27 2020 -0700

    add adaptive left margin for python site document body (apache#18828)

commit 045efb2
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Thu Jul 30 19:19:33 2020 -0700

    [NumPy] DLPack refactor and npx.from_numpy (apache#18656)

    * refactor dlpack and add from_numpy to npx

    * remove reference of DeepNumPy

    * map platform-dependent types to fixed-size types

    * update DMLC_LOG_FATAL_THROW

    * fix flaky

    * fix flaky

    * test no error

commit 608afef
Author: Xi Wang <xidulu@gmail.com>
Date:   Fri Jul 31 02:30:25 2020 +0800

    Fix dirichlet flaky tests (apache#18817)

    * make parameter smoother

    * minor changes

commit 6bbd531
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Jul 29 20:31:19 2020 +0000

    Update clang-tidy integration (apache#18815)

    Run clang-tidy via cmake only on the code managed by mxnet (and not 3rdparty dependencies), update to clang-tidy-10 and run clang-tidy-10 -fix to fix all the warnings that are enforced on CI.

    Developers can run clang-tidy by specifying the -DCMAKE_CXX_CLANG_TIDY="clang-tidy-10" to cmake, or using the python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh build_ubuntu_cpu_clang_tidy script.

commit b685fad
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 12:22:12 2020 -0700

    use regex that is supported by all browsers (apache#18811)

commit 9308aca
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 12:21:42 2020 -0700

    remove other language bindings section from website api page (apache#18783)

    * remove other language bindings section from api page

    * remove language binding docs redirect

    * add call for contribution banner

    * modify call for contribution wording

    Co-authored-by: Aaron Markham <markhama@amazon.com>

    * more wording modification

    Co-authored-by: Aaron Markham <markhama@amazon.com>

    * add hyperlink to 1.x version in banner

    * add reference to the C api deprecation github issue

    Co-authored-by: Aaron Markham <markhama@amazon.com>

commit 915f6b4
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 11:28:37 2020 -0700

    Remove deepnumpy reference and move Numpy tutorials to top level (apache#18798)

    * move np tutorials to top level

    * replace deepnumpy reference to np

    * add info in card

    * remove useless entry

    * replace NDArray API card with np.ndarray

    * python site refactor

    * remove duplicated drawer and refactor layout

    * extend document width to 100% for xl devices

commit e9829e7
Author: Joe Evans <github@250hacks.net>
Date:   Tue Jul 28 18:53:29 2020 -0700

    Cherry-pick large tensor support from apache#18752. (apache#18804)

    Co-authored-by: Joe Evans <joeev@amazon.com>

commit 126636c
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Jul 28 22:11:20 2020 +0000

    Fix naming in runtime_functions.sh (apache#18795)

commit f83dbac
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Tue Jul 28 11:48:05 2020 -0700

    remove executor manager from API doc (apache#18802)

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit 7908d7e
Author: Yiyan66 <57363390+Yiyan66@users.noreply.github.com>
Date:   Tue Jul 28 15:11:19 2020 +0800

    [numpy] fix flaky mixed precision binary error (apache#18660)

    * temp

    * change test

    * fix bad func call

    * test

    * rectify

    * doc

    * change test

commit a807f6d
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Jul 27 22:06:50 2020 -0700

    [NumPy] loss for np array (apache#17196)

    * loss for np/nd array

    * fix flaky

commit 74430a9
Author: phile <phile_999@126.com>
Date:   Tue Jul 28 06:44:54 2020 +0800

    remove NLL in metric (apache#18794)

commit 9e77e81
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Mon Jul 27 14:27:52 2020 -0700

    Update CUB and include it only for CUDA < 11 (apache#18799)

commit 98b3f73
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Sat Jul 25 16:19:36 2020 -0700

    add support for np.ndarray in autograd.function (apache#18790)

commit c1db2d5
Author: Leonard Lausen <lausen@amazon.com>
Date:   Sat Jul 25 16:58:45 2020 +0000

    Remove caffe plugin (apache#18787)

    * Remove caffe plugin

    * Fix

    * Remove CXX14 feature flag

    * Update test

commit 2fbd182
Author: Leonard Lausen <lausen@amazon.com>
Date:   Sat Jul 25 02:48:30 2020 +0000

    Split up CI sanity test functions to enable fine-grained trigger (apache#18786)

    Developers can now trigger fine grained checks:

    python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh sanity_python
    python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh sanity_license
    etc

commit 06b5d22
Author: Serge Panev <spanev@nvidia.com>
Date:   Fri Jul 24 14:22:42 2020 -0700

    ONNX import: use Conv pad attribute for symmetrical padding (apache#18675)

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit e31ad77
Author: Yang Shi <yangshia@amazon.com>
Date:   Thu Jul 23 11:33:31 2020 -0700

    set website default version to current stable (1.6) version (apache#18738)

    * set website default version - test redirect

    * enable first time redirect on all master website pages

    * update test code

    * remove unnecessary test code

    * fix typo

    * delete test code

commit 02ae456
Author: Dick Carter <dick.carter@comcast.net>
Date:   Thu Jul 23 11:17:10 2020 -0700

    Improve environment variable handling in unittests (apache#18424)

    This PR makes it easy to create unittests that require specific settings of environment variables, while avoiding the pitfalls (discussed in comments section). This PR can be considered a recasting and expansion of the great vision of @larroy in creating the EnvManager class in apache#13140.

    In its base form, the facility is a drop-in replacement for EnvManager, and is called 'environment':

    with environment('MXNET_MY_NEW_FEATURE', '1'):
        <test with feature enabled>
    with environment('MXNET_MY_NEW_FEATURE', '0'):
        <test with feature disabled>

    Like EnvManager, this facility takes care of the save/restore of the previous environment variable state, including when exceptions are raised. In addition though, this PR introduces the features:

        A similarly-named unittest decorator: @with_environment(key, value)
        The ability to pass in multiple env vars as a dict (as is needed for some tests) in both forms, so for example:

    with environment({'MXNET_FEATURE_A': '1',
                      'MXNET_FEATURE_B': '1'}):
        <test with both features enabled>

        Works on Windows! This PR includes a wrapping of the backend's setenv() and getenv() functions, and uses this direct access to the backend environment to keep it in sync with the python environment. This works around the problem that the C Runtime on Windows gets a snapshot of the Python environment at startup that is immutable from Python.
        with environment() has a simple implementation using the @contextmanager decorator
        Tests are included that validate the facility works with all combinations of before_val/set_val, namely unset/unset, unset/set, set/unset, set/set.

    There were 5 unittests previously using EnvManager, and this PR shifts those uses to with environment():, while converting over 20 other ad-hoc uses of os.environ[] within the unittests. This PR also enables those unittests that were bypassed on Windows (due to the inability to set environment variables) to run on all platforms.

    Further Comments

    Environment variables are a two-edged sword- they enable useful operating modes for testing, debugging or niche applications, but like all features they must be tested. The correct approach for testing with a particular env var setting is:

    def set_env_var(key, value):
        if value is None:
            os.environ.pop(key, None)
        else:
            os.environ[key] = value

    old_env_var_value = os.environ.get(env_var_name)
    try:
        set_env_var(env_var_name, test_env_var_value)
        <perform test>
    finally:
        set_env_var(env_var_name, old_env_var_value )

    The above code makes no assumption about whether the before-test and within-test state of the env var is set or unset, and restores the prior environment even if the test raises an exception. This represents a lot of boiler-plate code that could be potentially mishandled. The with environment() context makes it simple to handle all this properly. If an entire unittest wants a forced env var setting, then using the @with_environment() decorator avoids the code indent of the with environment() approach if used otherwise within the test.

commit 18af71e
Author: Leonard Lausen <lausen@amazon.com>
Date:   Thu Jul 23 18:09:10 2020 +0000

    CI: Migrate remaining Dockerfiles to docker-compose.yml and remove unused code (apache#18771)

    * Migrate remaining Dockerfiles to docker-compose.yml

    - Delete unused Dockerfiles
    - Delete unused install/*.sh scripts
    - Consolidate ubuntu_gpu_tensorrt and ubuntu_gpu
    - Remove deprecated logic in ci/build.py (no longer needed with
      docker-compose)
    - Remove ci/docker_cache.py (no longer needed with docker-compose)

    * Fix

    * Fix

    * Fix ubuntu_cpu_jekyll

commit 1928117
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Tue Jul 21 23:35:15 2020 -0700

    Fix crash when accessing already destructed static variables (apache#18768)

commit a330a02
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Jul 22 06:31:47 2020 +0000

    Fix mx.symbol.numpy._Symbol.__deepcopy__ logic error (apache#18686)

    * Fix mx.symbol.numpy._Symbol.__deepcopy__ logic error

    Performed shallow copy instead of deep copy

    * Test

    * Fix test

commit 9548b0c
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Jul 21 21:42:01 2020 +0000

    Remove duplicate settings in .codecov.yml (apache#18763)

    New PRs started showing the codecov/project badge again due apparent change in codecov's backend resolving these duplicate options specified in .codecov.yml
ciyongch pushed a commit to ciyongch/incubator-mxnet that referenced this pull request Aug 17, 2020
TaoLv added a commit that referenced this pull request Aug 18, 2020
Co-authored-by: Tao Lv <tao.a.lv@intel.com>
zheyuye added a commit to zheyuye/incubator-mxnet that referenced this pull request Aug 19, 2020
commit 8794a0a
Author: Zhaoqi Zhu <zhaoqizh@usc.edu>
Date:   Tue Aug 18 17:36:42 2020 -0700

    Numpy Dot Large Tensor Fix (apache#18925)

    * fix np dot

    * add test

    * fix test

    * tweak test

    Co-authored-by: Zhu <zhaoqzhu@3c22fbbb4e1a.ant.amazon.com>
    Co-authored-by: Ubuntu <ubuntu@ip-172-31-10-124.us-west-2.compute.internal>
    Co-authored-by: Ubuntu <ubuntu@ip-172-31-6-47.us-west-2.compute.internal>

commit 32994bb
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Tue Aug 18 15:15:50 2020 -0700

    Fix setting cudnn bias stride (apache#18905)

commit c789d02
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Aug 18 16:57:35 2020 +0000

    Fix Python docs (apache#18924)

    * Fix Python docs

    * Fix

    * Fix

commit 0afeb97
Author: nihui <shuizhuyuanluo@126.com>
Date:   Tue Aug 18 22:03:57 2020 +0800

    Fix instancenorm math equation (apache#18955)

commit e06ee4e
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Mon Aug 17 23:07:37 2020 -0700

    Faster GPU frozen BatchNorm (apache#17368)

    * Better frozen batchnorm

    * Continue FreezeBN

    * Optimizations

    * Reduce number of mod operations

    * Cleaning

    * Fixing frozen bn with fix_gamma=False

    * Fix lint in BN

    * Backward frozen batchnorm

    * More work on backward of Frozen BN

    * Let it compile

    * NCHW Frozen BN backward

    * Frozen BN backward NHWC

    * Cleaning

    * Remove the change to Makefile

    * Fix from rebase

    * Temp space for BN backward

    * Fix from review

    * Fix lint

    * Changes from review

commit 2610c10
Author: Serge Panev <spanev@nvidia.com>
Date:   Sat Aug 15 19:30:50 2020 -0700

    Change Partition API's options_map to std::unordered_map (apache#18929)

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit be12c8d
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Fri Aug 14 17:35:34 2020 -0700

    [Website] adjust website structure (apache#18839)

    * adjust website structure

    * update per comments

    * adjust ecosystem page

    * add ray tune

    * fix issues

    * update notebooks

    * fix breakage

commit daf8b43
Author: Sam Skalicky <samskalicky@gmail.com>
Date:   Fri Aug 14 14:36:30 2020 -0700

    Support extra inputs for subgraph ops (apache#18779)

    Support additional inputs to custom subgraph ops that are not direct dependencies to ops in the subgraph. This will enable various use cases: custom control flow ops, custom ops that maintain a state that should be saved/loaded, etc.

    Highlights:

    * Added test that uses a graph pass (addInputPass) to add a new custom input to the subgraph op

    * Added new optional argument (clear) to hybridize & optimize_for APIs in Gluon Block to enable multiple optimizations

    * refactored lib_api.h JSON utilities

    * added new Graph data structure utilities to simplify custom graph passes

    * refactored custom op registration

    * enhanced custom subgraph op to support additional inputs to subgraph op that is not an input to ops in the subgraph

    * updated subgraph & graph pass READMEs

    * Added error messaging from external library

commit 86e96dc
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Thu Aug 13 22:27:10 2020 -0700

    Fix backward of arctan2 and rarctan2 scalar on GPU (apache#18440)

commit ee80b77
Author: bgawrych <bartlomiej.gawrych@intel.com>
Date:   Fri Aug 14 07:19:52 2020 +0200

    Fix default CPU allocator memory alignment (apache#18885)

    * Replace std::malloc to aligned memory allocation in Pooled StorageManager

    * Add test checking CPU memory alignment

    * Fix memory allocation success check

    * Fix sanity

commit 344587f
Author: MoisesHer <50716238+MoisesHer@users.noreply.github.com>
Date:   Thu Aug 13 22:18:26 2020 -0700

    Safe accumulation for computing gradient in Embedding & Take (apache#18385)

    * Safe accumulation for computing gradient in Embedding & Take

    * Fix bug in TakeGrad: initialize temporal storage for safe_accumulation

    * fix lint

    * make MXNET_SAFE_ACCUMULATION compatible with Windows

    * Increase test coverage: small inputs & SAFE_ACCUMULATION

commit a2b400c
Author: Joshua Z. Zhang <cheungchih@gmail.com>
Date:   Wed Aug 12 22:47:47 2020 -0700

    fix center element not being copied (apache#18917)

commit e2cbf66
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Aug 12 16:22:17 2020 +0000

    Revert "drop list support for gluon trainer (apache#18877)" (apache#18892)

    This reverts commit d5fdcbf.

commit 83d2af5
Author: Xi Wang <xidulu@gmail.com>
Date:   Wed Aug 12 15:25:17 2020 +0800

    Gamma reparameterization gradient (apache#18852)

    * gamma grad wip

    * gamma grad wip

    * test tbd

    * fix grad

    * change scale to the frontend

    * fix bugs

    * change distributions.gamma

    * fix test and operator tune

commit f2a8b97
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Aug 12 01:51:11 2020 +0000

    Remove manually created symbolic link to ninja-build (apache#18906)

    apache@6bcfce9 for master branch

commit 016c166
Author: JackieWu <wkcn@live.cn>
Date:   Wed Aug 12 03:54:46 2020 +0800

    remove upper bound (apache#18857)

commit e101d68
Author: Xi Wang <xidulu@gmail.com>
Date:   Tue Aug 11 12:50:26 2020 +0800

    [Gluon] Add VAE demo (apache#18758)

    * add VAE demo

    * minor changes

    * change format to md

    * minor changes

    * add liscence

    * Update VAE.md

    * update vae demo

    * remove unnecessary files

commit d0e17e5
Author: Ke Han <38852697+hanke580@users.noreply.github.com>
Date:   Mon Aug 10 12:48:56 2020 +0800

    [Numpy] FFI: sort, argsort, vstack etc (apache#17857)

    * * sort FFI

    * * argsort FFI

    * * vstack, row_stack FFI

    * * greater FFI

    * * inner FFI

    * multinomial FFI

    * rand FFI

    * randn FFI

    * * Fix input out of index and rscalar of greater

    * * Fix ndarray situation

    * * Fix sanity

    * fix lint

    * fix bugs

    * * Remove duplicate operator (greater)

    * * Fix Tuple downcast Error (Only Integer)
    * Fix segmentation fault(pointer)

    Co-authored-by: Sheng Zha <zhasheng@amazon.com>

commit 5c50475
Author: Liu, Hao <haoliuhust@hotmail.com>
Date:   Mon Aug 10 08:15:22 2020 +0800

    fix pooling_convention warning when convert model to onnx (apache#18529)

    * fix  pooling_convention warning

    * fix pooling_convention warning

    * fix lint

    Co-authored-by: JackieWu <wkcn@live.cn>

commit d52d9c6
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Sun Aug 9 13:33:03 2020 -0700

    Revert "Add SOVERSION when build shared libmxnet.so library (apache#17815)" (apache#18882)

    This reverts commit d101c3c.

commit 706c369
Author: Ziyue Huang <ziyue@apache.org>
Date:   Sun Aug 9 07:55:16 2020 +0800

    fix trainer when the model involves share_parameters (apache#18880)

    * fix trainer when using shared_param

    * add unittest

commit cf908fd
Author: Xingjian Shi <xshiab@connect.ust.hk>
Date:   Fri Aug 7 19:55:36 2020 -0700

    [Numpy][Bugfix] Add hybridization test to loss layers (apache#18876)

    * Test for hybridization

    * fix typo

    * fix

    * fix test

    * update

    * Update loss.py

    * fix bug of sum

commit d5fdcbf
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Fri Aug 7 18:11:16 2020 -0700

    drop list support for gluon trainer (apache#18877)

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-42-138.ec2.internal>

commit dde635f
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Aug 7 21:16:24 2020 +0000

    Re-enable the linker version scripts for binary distribution (apache#18872)

    * Symbol visibility

    * Fix

commit 1694d2f
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Fri Aug 7 11:21:22 2020 -0700

    [CI] remove data.mxnet.io usage for CI stability (apache#18871)

    * remove duplicate mnist functions

    * remove data.mxnet.io usage in tests

    * add waitall

commit 708a900
Author: Serge Panev <spanev@nvidia.com>
Date:   Fri Aug 7 10:46:22 2020 -0700

    Fix a bug in MXNet-TensorRT (apache#18870)

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit d101c3c
Author: Gustavo Alvarez <462213+sl1pkn07@users.noreply.github.com>
Date:   Fri Aug 7 04:34:51 2020 +0200

    Add SOVERSION when build shared libmxnet.so library (apache#17815)

    https://en.wikipedia.org/wiki/Soname
    https://cmake.org/cmake/help/latest/prop_tgt/SOVERSION.html

    Co-authored-by: Leonard Lausen <lausen@amazon.com>

commit a3eabf0
Author: Leonard Lausen <lausen@amazon.com>
Date:   Thu Aug 6 15:52:52 2020 +0000

    Fix MXLibInfoCompiledWithCXX11ABI (apache#18864)

    * Fix MXLibInfoCompiledWithCXX11ABI

    * Fix test

commit 84f8984
Author: bgawrych <bartlomiej.gawrych@intel.com>
Date:   Thu Aug 6 04:32:39 2020 +0200

    ElementWiseSum fix for oneDNN  (apache#18859)

    * Fix ElementwiseSum for DNNL

    * Add test for oneDNN ElemwiseSum

    Co-authored-by: Bart Gawrych <gawrych.bartlomiej@intel.com>

commit a78f137
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Aug 5 14:24:46 2020 -0700

    improve python api website ux - make toc sticky (apache#18863)

commit 0f65ef6
Author: Xi Wang <xidulu@gmail.com>
Date:   Wed Aug 5 10:48:50 2020 +0800

    nb fix (apache#18858)

commit 7b7cef5
Author: Serge Panev <spanev@nvidia.com>
Date:   Tue Aug 4 18:23:48 2020 -0700

     MXNet-TRT: Add PrePartition param caching - move init_tensorrt_params logic  (apache#18490)

    * Update to TRT 7 API

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Add PrePartition param caching - move init_tensorrt_params logic

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Handle node with no defined input

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Remove tmp comment

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit 59e200a
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Tue Aug 4 17:01:23 2020 -0700

    fix nn.dense doc (apache#18830)

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit 2e97226
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Aug 4 21:11:32 2020 +0000

    Fix edge case when casting gluon Block before export (apache#18853)

    * Fix edge case when casting gluon Block before export

    Fixes apache#18843

    * Fix gpu test

commit b8eccc8
Author: Yang Shi <yangshia@amazon.com>
Date:   Tue Aug 4 14:08:09 2020 -0700

    fix set default website version rewrite rule for cdn (apache#18856)

commit 7a40219
Author: Serge Panev <spanev@nvidia.com>
Date:   Tue Aug 4 10:34:21 2020 -0700

    Remove check for subgraph with cycles (apache#18555)

    * Remove check for subgraph with cycles

    Signed-off-by: Serge Panev <spanev@nvidia.com>

    * Add comments

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit 95fa63f
Author: Serge Panev <spanev@nvidia.com>
Date:   Mon Aug 3 17:15:02 2020 -0700

    Update the onnx-tensorrt submodule - CI to TRT7 (apache#18574)

commit 7f2e314
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Mon Aug 3 16:09:48 2020 -0700

    update setup.py (apache#18850)

    * update setup.py

    * update python version

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit f872b43
Author: Leonard Lausen <lausen@amazon.com>
Date:   Mon Aug 3 20:11:06 2020 +0000

    Protobuf_USE_STATIC_LIBS must be set on Apple too (apache#18851)

    Fixes apache#18840

commit 4bb8224
Author: Yang Shi <yangshia@amazon.com>
Date:   Mon Aug 3 12:30:13 2020 -0700

    Fixed python website double scroller and improve UX (apache#18845)

    * make python site header scroll aware and avoid double scroller

    * add compiled assets

    * adjust python site second header height

    * add new line

    * set focus to main content on DOM load

commit 7a5a488
Author: Iblis Lin <iblis@hs.ntnu.edu.tw>
Date:   Tue Aug 4 03:28:08 2020 +0800

    Fix broken link in docs/README.md (apache#18847)

commit 534cdbc
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Aug 3 11:58:33 2020 -0700

    Create greetings.yml (apache#18842)

commit 9fd2cce
Author: kpuatamazon <56725192+kpuatamazon@users.noreply.github.com>
Date:   Mon Aug 3 17:40:44 2020 +0100

    Update tests/README.md Docker instructions to match ci/README.md (apache#18848)

    Documentation was missing python3-docker and had an outdated platform.

commit 54b9e9c
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Aug 3 08:59:33 2020 -0700

    remove unnecessary usage of pretrained models, and prefer smaller size (apache#18844)

commit 51340d8
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Sat Aug 1 16:23:03 2020 -0700

    Add compiled_with_cxx11_abi API  (apache#18836)

    * draft

    * add impl

    * add test

    * set default val

    Co-authored-by: Ubuntu <ubuntu@ip-172-31-42-138.ec2.internal>

commit 5a22193
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Fri Jul 31 17:06:17 2020 -0700

    [NumPy] allow mixed array types (apache#18562)

    * allow mixed types in array func protocol

    * fix apache#18746

    * add support for memory share check

commit 08a5ee3
Author: Tao Lv <tao.a.lv@intel.com>
Date:   Sat Aug 1 03:38:20 2020 +0800

    fix gelu to use erf based algorithm (apache#18827)

commit ac36089
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Jul 31 04:54:10 2020 +0000

    Fixup move gluon.metric api docs (apache#18748)

    * Fix metric API page

    * Update index.rst

commit 7a24006
Author: Leonard Lausen <lausen@amazon.com>
Date:   Fri Jul 31 02:58:55 2020 +0000

    Enable DIST_KVSTORE by default in staticbuild (apache#18796)

    * Enable DIST_KVSTORE by default in staticbuild

    set(USE_DIST_KVSTORE ON CACHE BOOL "Build with DIST_KVSTORE support")

    * Ensure static linkage of dependencies

    * Fix for OS X

    * Fix shell syntax

    * Alternate approach to force static linkage of libprotobuf

commit aa53291
Author: Yang Shi <yangshia@amazon.com>
Date:   Thu Jul 30 19:53:27 2020 -0700

    add adaptive left margin for python site document body (apache#18828)

commit 045efb2
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Thu Jul 30 19:19:33 2020 -0700

    [NumPy] DLPack refactor and npx.from_numpy (apache#18656)

    * refactor dlpack and add from_numpy to npx

    * remove reference of DeepNumPy

    * map platform-dependent types to fixed-size types

    * update DMLC_LOG_FATAL_THROW

    * fix flaky

    * fix flaky

    * test no error

commit 608afef
Author: Xi Wang <xidulu@gmail.com>
Date:   Fri Jul 31 02:30:25 2020 +0800

    Fix dirichlet flaky tests (apache#18817)

    * make parameter smoother

    * minor changes

commit 6bbd531
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Jul 29 20:31:19 2020 +0000

    Update clang-tidy integration (apache#18815)

    Run clang-tidy via cmake only on the code managed by mxnet (and not 3rdparty dependencies), update to clang-tidy-10 and run clang-tidy-10 -fix to fix all the warnings that are enforced on CI.

    Developers can run clang-tidy by specifying the -DCMAKE_CXX_CLANG_TIDY="clang-tidy-10" to cmake, or using the python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh build_ubuntu_cpu_clang_tidy script.

commit b685fad
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 12:22:12 2020 -0700

    use regex that is supported by all browsers (apache#18811)

commit 9308aca
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 12:21:42 2020 -0700

    remove other language bindings section from website api page (apache#18783)

    * remove other language bindings section from api page

    * remove language binding docs redirect

    * add call for contribution banner

    * modify call for contribution wording

    Co-authored-by: Aaron Markham <markhama@amazon.com>

    * more wording modification

    Co-authored-by: Aaron Markham <markhama@amazon.com>

    * add hyperlink to 1.x version in banner

    * add reference to the C api deprecation github issue

    Co-authored-by: Aaron Markham <markhama@amazon.com>

commit 915f6b4
Author: Yang Shi <yangshia@amazon.com>
Date:   Wed Jul 29 11:28:37 2020 -0700

    Remove deepnumpy reference and move Numpy tutorials to top level (apache#18798)

    * move np tutorials to top level

    * replace deepnumpy reference to np

    * add info in card

    * remove useless entry

    * replace NDArray API card with np.ndarray

    * python site refactor

    * remove duplicated drawer and refactor layout

    * extend document width to 100% for xl devices

commit e9829e7
Author: Joe Evans <github@250hacks.net>
Date:   Tue Jul 28 18:53:29 2020 -0700

    Cherry-pick large tensor support from apache#18752. (apache#18804)

    Co-authored-by: Joe Evans <joeev@amazon.com>

commit 126636c
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Jul 28 22:11:20 2020 +0000

    Fix naming in runtime_functions.sh (apache#18795)

commit f83dbac
Author: Haibin Lin <linhaibin.eric@gmail.com>
Date:   Tue Jul 28 11:48:05 2020 -0700

    remove executor manager from API doc (apache#18802)

    Co-authored-by: Lin <haibilin@a483e7be4c92.ant.amazon.com>

commit 7908d7e
Author: Yiyan66 <57363390+Yiyan66@users.noreply.github.com>
Date:   Tue Jul 28 15:11:19 2020 +0800

    [numpy] fix flaky mixed precision binary error (apache#18660)

    * temp

    * change test

    * fix bad func call

    * test

    * rectify

    * doc

    * change test

commit a807f6d
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Mon Jul 27 22:06:50 2020 -0700

    [NumPy] loss for np array (apache#17196)

    * loss for np/nd array

    * fix flaky

commit 74430a9
Author: phile <phile_999@126.com>
Date:   Tue Jul 28 06:44:54 2020 +0800

    remove NLL in metric (apache#18794)

commit 9e77e81
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Mon Jul 27 14:27:52 2020 -0700

    Update CUB and include it only for CUDA < 11 (apache#18799)

commit 98b3f73
Author: Sheng Zha <szha@users.noreply.github.com>
Date:   Sat Jul 25 16:19:36 2020 -0700

    add support for np.ndarray in autograd.function (apache#18790)

commit c1db2d5
Author: Leonard Lausen <lausen@amazon.com>
Date:   Sat Jul 25 16:58:45 2020 +0000

    Remove caffe plugin (apache#18787)

    * Remove caffe plugin

    * Fix

    * Remove CXX14 feature flag

    * Update test

commit 2fbd182
Author: Leonard Lausen <lausen@amazon.com>
Date:   Sat Jul 25 02:48:30 2020 +0000

    Split up CI sanity test functions to enable fine-grained trigger (apache#18786)

    Developers can now trigger fine grained checks:

    python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh sanity_python
    python ci/build.py -R --platform ubuntu_cpu /work/runtime_functions.sh sanity_license
    etc

commit 06b5d22
Author: Serge Panev <spanev@nvidia.com>
Date:   Fri Jul 24 14:22:42 2020 -0700

    ONNX import: use Conv pad attribute for symmetrical padding (apache#18675)

    Signed-off-by: Serge Panev <spanev@nvidia.com>

commit e31ad77
Author: Yang Shi <yangshia@amazon.com>
Date:   Thu Jul 23 11:33:31 2020 -0700

    set website default version to current stable (1.6) version (apache#18738)

    * set website default version - test redirect

    * enable first time redirect on all master website pages

    * update test code

    * remove unnecessary test code

    * fix typo

    * delete test code

commit 02ae456
Author: Dick Carter <dick.carter@comcast.net>
Date:   Thu Jul 23 11:17:10 2020 -0700

    Improve environment variable handling in unittests (apache#18424)

    This PR makes it easy to create unittests that require specific settings of environment variables, while avoiding the pitfalls (discussed in comments section). This PR can be considered a recasting and expansion of the great vision of @larroy in creating the EnvManager class in apache#13140.

    In its base form, the facility is a drop-in replacement for EnvManager, and is called 'environment':

    with environment('MXNET_MY_NEW_FEATURE', '1'):
        <test with feature enabled>
    with environment('MXNET_MY_NEW_FEATURE', '0'):
        <test with feature disabled>

    Like EnvManager, this facility takes care of the save/restore of the previous environment variable state, including when exceptions are raised. In addition though, this PR introduces the features:

        A similarly-named unittest decorator: @with_environment(key, value)
        The ability to pass in multiple env vars as a dict (as is needed for some tests) in both forms, so for example:

    with environment({'MXNET_FEATURE_A': '1',
                      'MXNET_FEATURE_B': '1'}):
        <test with both features enabled>

        Works on Windows! This PR includes a wrapping of the backend's setenv() and getenv() functions, and uses this direct access to the backend environment to keep it in sync with the python environment. This works around the problem that the C Runtime on Windows gets a snapshot of the Python environment at startup that is immutable from Python.
        with environment() has a simple implementation using the @contextmanager decorator
        Tests are included that validate the facility works with all combinations of before_val/set_val, namely unset/unset, unset/set, set/unset, set/set.

    There were 5 unittests previously using EnvManager, and this PR shifts those uses to with environment():, while converting over 20 other ad-hoc uses of os.environ[] within the unittests. This PR also enables those unittests that were bypassed on Windows (due to the inability to set environment variables) to run on all platforms.

    Further Comments

    Environment variables are a two-edged sword- they enable useful operating modes for testing, debugging or niche applications, but like all features they must be tested. The correct approach for testing with a particular env var setting is:

    def set_env_var(key, value):
        if value is None:
            os.environ.pop(key, None)
        else:
            os.environ[key] = value

    old_env_var_value = os.environ.get(env_var_name)
    try:
        set_env_var(env_var_name, test_env_var_value)
        <perform test>
    finally:
        set_env_var(env_var_name, old_env_var_value )

    The above code makes no assumption about whether the before-test and within-test state of the env var is set or unset, and restores the prior environment even if the test raises an exception. This represents a lot of boiler-plate code that could be potentially mishandled. The with environment() context makes it simple to handle all this properly. If an entire unittest wants a forced env var setting, then using the @with_environment() decorator avoids the code indent of the with environment() approach if used otherwise within the test.

commit 18af71e
Author: Leonard Lausen <lausen@amazon.com>
Date:   Thu Jul 23 18:09:10 2020 +0000

    CI: Migrate remaining Dockerfiles to docker-compose.yml and remove unused code (apache#18771)

    * Migrate remaining Dockerfiles to docker-compose.yml

    - Delete unused Dockerfiles
    - Delete unused install/*.sh scripts
    - Consolidate ubuntu_gpu_tensorrt and ubuntu_gpu
    - Remove deprecated logic in ci/build.py (no longer needed with
      docker-compose)
    - Remove ci/docker_cache.py (no longer needed with docker-compose)

    * Fix

    * Fix

    * Fix ubuntu_cpu_jekyll

commit 1928117
Author: Przemyslaw Tredak <ptredak@nvidia.com>
Date:   Tue Jul 21 23:35:15 2020 -0700

    Fix crash when accessing already destructed static variables (apache#18768)

commit a330a02
Author: Leonard Lausen <lausen@amazon.com>
Date:   Wed Jul 22 06:31:47 2020 +0000

    Fix mx.symbol.numpy._Symbol.__deepcopy__ logic error (apache#18686)

    * Fix mx.symbol.numpy._Symbol.__deepcopy__ logic error

    Performed shallow copy instead of deep copy

    * Test

    * Fix test

commit 9548b0c
Author: Leonard Lausen <lausen@amazon.com>
Date:   Tue Jul 21 21:42:01 2020 +0000

    Remove duplicate settings in .codecov.yml (apache#18763)

    New PRs started showing the codecov/project badge again due apparent change in codecov's backend resolving these duplicate options specified in .codecov.yml
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4 participants