v0.2.0

BEAST v2.7 compatible

BEASTvntr v0.1.4pre

update FiniteIntegerData for BEAST issue #899

BEASTvntr 0.1.3

Fixes breaking changes introduced BEAST v2.5.0, concerning handling data types. Thanks to @rbouckaert

BEASTvntr 0.1.2

Fix for issue with shared Sainudiin models, thanks to @rbouckaert

BEASTvntr 0.1.1

• Introduced proper handling of ambiguous characters.
• Simplified code in FiniteIntegerData and CSVImporter.

BEASTvntr 0.1.0

• Implemented the models with default parameterization, denoted with Vanilla.
• Fixed small bug where EJML was not being used for eigendecomposition in some models.

BEASTvntr 0.0.2

Improvements

• CSV files can now import repeats homogeneously (1 alignment for all loci) or in-homogeneously (separate alignment for each locus)
• Eigen decomposition is now performed using the EJML library, to resolve some of the numerical issues

Other Changes

• Transformed parameter a1 into oneOnA1
• Renamed parameters r_b,i_eq into biasMagnitude, focalPoint

v0.0.1

Example data now gets included in release