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* update docker instructions * update default python to 3.7 * update readme * enable windows use * enable docs on docker * update Docker and add jupyter + powershell script * fix docs building docker info * fixes Co-authored-by: ahartikainen <ahartikainen@github.com>
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| Original file line number | Diff line number | Diff line change |
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| """ | ||
| Point Estimate Pairplot | ||
| =============== | ||
| ======================= | ||
| _thumb: .2, .5 | ||
| """ | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,6 +1,6 @@ | ||
| """ | ||
| Point Estimate Pairplot | ||
| =============== | ||
| ======================= | ||
| _thumb: .2, .5 | ||
| """ | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,86 @@ | ||
| if (!(Test-Path env:SRC_DIR)) { | ||
| $SRC_DIR=$pwd.Path | ||
| } | ||
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| $build = $false | ||
| $clearCache = $false | ||
| $docs = $false | ||
| $lab = $false | ||
| $notebook = $false | ||
| $shell = $false | ||
| $test = $false | ||
|
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| foreach ($arg in $args) { | ||
| if ($arg -eq "--build") { | ||
| $build = $true | ||
| } | ||
| elseif ($arg -eq "--clear-cache") { | ||
| $clearCache = $true | ||
| } | ||
| elseif ($arg -eq "--docs") { | ||
| $docs = $true | ||
| } | ||
| elseif ($arg -eq "--lab") { | ||
| $lab = $true | ||
| } | ||
| elseif ($arg -eq "--notebook") { | ||
| $notebook = $true | ||
| } | ||
| elseif ($arg -eq "--shell") { | ||
| $shell = $true | ||
| } | ||
| elseif ($arg -eq "--test") { | ||
| $test = $true | ||
| } | ||
| } | ||
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| if ($build) { | ||
| echo "Building Docker Image" | ||
| # Build container for use of testing or notebook | ||
| docker build \ | ||
| -t arviz \ | ||
| -f $SRC_DIR/scripts/Dockerfile ` | ||
| --build-arg SRC_DIR=. $SRC_DIR ` | ||
| --build-arg PYTHON_VERSION=${PYTHON_VERSION} ` | ||
| --build-arg PYSTAN_VERSION=${PYSTAN_VERSION} ` | ||
| --build-arg PYRO_VERSION=${PYRO_VERSION} ` | ||
| --build-arg PYTORCH_VERSION=${PYTORCH_VERSION} ` | ||
| --build-arg EMCEE_VERSION=${EMCEE_VERSION} ` | ||
| --build-arg TF_VERSION=${TF_VERSION} ` | ||
| --build-arg PYMC3_VERSION=${PYMC3_VERSION} | ||
| } | ||
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| if ($clearCache) { | ||
| echo "Removing cached files and models" | ||
| Get-ChildItem -Path $SRC_DIR -Recurse -Force -Include "__pycache__" | Remove-Item -Force -Recurse | ||
| Get-ChildItem -Path ($SRC_DIR + "\arviz\tests\saved_models") -Recurse -Force -Include "*.pkl" | Remove-Item -Force -Recurse | ||
| } | ||
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| if ($test) { | ||
| echo "Testing Arviz" | ||
| docker run --mount type=bind,source=$SRC_DIR,target=/opt/arviz/ --rm arviz:latest bash -c ` | ||
| "NUMBA_DISABLE_JIT=1 pytest -v arviz/tests/ --cov=arviz/" | ||
| } | ||
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| if ($docs) { | ||
| echo "Build docs with sphinx" | ||
| docker run --mount type=bind,source=$SRC_DIR,target=/opt/arviz --name arviz_sphinx --rm arviz:latest bash -c ` | ||
| "if [ -d ./doc/build ]; then python -msphinx -M clean doc doc/build; fi && sphinx-build doc doc/build -b html" | ||
| } | ||
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| if ($shell) { | ||
| echo "Starting Arviz Container Shell" | ||
| docker run -it --mount type=bind,source=$SRC_DIR,target=/opt/arviz --name arviz_shell --rm arviz:latest /bin/bash | ||
| } | ||
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| if ($notebook) { | ||
| echo "Starting Arviz Container Jupyter server" | ||
| docker run --mount type=bind,source=$SRC_DIR,target=/opt/arviz/ --name jupyter-dock -it -d -p 8888:8888 arviz | ||
| docker exec -it jupyter-dock bash -c "jupyter notebook --ip 0.0.0.0 --no-browser --allow-root" | ||
| } | ||
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| if ($lab) { | ||
| echo "Starting Arviz Container Jupyter server with Jupyter Lab interface" | ||
| docker run --mount type=bind,source=$SRC_DIR,target=/opt/arviz/ --name jupyter-dock -it -d -p 8888:8888 arviz | ||
| docker exec -it jupyter-dock bash -c "jupyter lab --ip 0.0.0.0 --no-browser --allow-root" | ||
| } |
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