[BUGFIX] Order of partial absorption was not respected #2407
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| name: Build | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| name: ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| name: [ | |
| ubuntu-doc, | |
| ubuntu-clang-15-debug, | |
| ubuntu-gcc-11, | |
| ubuntu-gcc-12-debug, | |
| ubuntu-clang-15-nofortran, | |
| ubuntu-clang-16-nofortran, | |
| macos-gcc-13, | |
| macos-clang-16, | |
| ] | |
| include: | |
| - name: ubuntu-doc | |
| os: ubuntu-22.04 | |
| compiler: clang | |
| version: "15" | |
| doc: "yes" | |
| arts: "no" | |
| fortran: "no" | |
| check: "no" | |
| libcxx: "yes" | |
| buildtype: "Release" | |
| - name: ubuntu-clang-15-debug | |
| os: ubuntu-22.04 | |
| compiler: clang | |
| version: "15" | |
| doc: "no" | |
| arts: "yes" | |
| fortran: "yes" | |
| fortran-version: "11" | |
| check: "yes" | |
| libcxx: "yes" | |
| buildtype: "RelWithDebInfo" | |
| - name: ubuntu-gcc-11 | |
| os: ubuntu-22.04 | |
| compiler: gcc | |
| version: "11" | |
| doc: "no" | |
| arts: "yes" | |
| fortran: "yes" | |
| fortran-version: "11" | |
| check: "yes" | |
| libcxx: "no" | |
| buildtype: "Release" | |
| - name: ubuntu-gcc-12-debug | |
| os: ubuntu-22.04 | |
| compiler: gcc | |
| version: "12" | |
| doc: "no" | |
| arts: "yes" | |
| fortran: "yes" | |
| fortran-version: "12" | |
| check: "yes" | |
| libcxx: "no" | |
| buildtype: "RelWithDebInfo" | |
| - name: ubuntu-clang-15-nofortran | |
| os: ubuntu-22.04 | |
| compiler: clang | |
| version: "15" | |
| doc: "no" | |
| arts: "yes" | |
| fortran: "no" | |
| check: "yes" | |
| libcxx: "yes" | |
| buildtype: "Release" | |
| - name: ubuntu-clang-16-nofortran | |
| os: ubuntu-22.04 | |
| compiler: clang | |
| version: "16" | |
| doc: "no" | |
| arts: "yes" | |
| fortran: "no" | |
| check: "yes" | |
| libcxx: "yes" | |
| buildtype: "Release" | |
| - name: macos-gcc-13 | |
| os: macos-12 | |
| compiler: gcc | |
| version: "13" | |
| doc: "no" | |
| arts: "yes" | |
| fortran: "yes" | |
| fortran-version: "13" | |
| check: "yes" | |
| libcxx: "no" | |
| buildtype: "Release" | |
| - name: macos-clang-16 | |
| os: macos-12 | |
| compiler: clang | |
| version: "16" | |
| doc: "no" | |
| arts: "yes" | |
| fortran: "no" | |
| check: "yes" | |
| libcxx: "no" | |
| buildtype: "Release" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 10 | |
| - uses: actions/setup-python@v4 | |
| if: runner.os == 'macOS' | |
| with: | |
| python-version: '3.10' | |
| - name: Setup (Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| if [ "${{ matrix.compiler }}" = "clang" ] && [ "${{ matrix.version }}" -ge "13" ]; then | |
| sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys 15CF4D18AF4F7421 | |
| sudo add-apt-repository "deb http://apt.llvm.org/jammy/ llvm-toolchain-jammy-${{ matrix.version }} main" | |
| fi | |
| sudo apt-get update | |
| if [ "${{ matrix.compiler }}" = "gcc" ]; then | |
| sudo apt-get install -y g++-${{ matrix.version }} | |
| echo "CC=gcc-${{ matrix.version }}" >> $GITHUB_ENV | |
| echo "CXX=g++-${{ matrix.version }}" >> $GITHUB_ENV | |
| fi | |
| if [ "${{ matrix.fortran }}" = "yes" ]; then | |
| sudo apt-get install -y gfortran-${{ matrix.fortran-version }} | |
| echo "FC=gfortran-${{ matrix.fortran-version }}" >> $GITHUB_ENV | |
| echo "USEFORTRAN=1" >> $GITHUB_ENV | |
| else | |
| echo "USEFORTRAN=0" >> $GITHUB_ENV | |
| fi | |
| if [ "${{ matrix.compiler }}" = "clang" ]; then | |
| sudo apt-get install -y libunwind-dev clang++-${{ matrix.version }} | |
| echo "CC=clang-${{ matrix.version }}" >> $GITHUB_ENV | |
| echo "CXX=clang++-${{ matrix.version }}" >> $GITHUB_ENV | |
| fi | |
| if [ "${{ matrix.libcxx }}" = "yes" ]; then | |
| sudo apt-get install -y libc++-${{ matrix.version }}-dev libc++abi-${{ matrix.version }}-dev | |
| fi | |
| sudo apt-get install -y python3-minimal python3-pip python3-setuptools zlib1g-dev libopenblas-dev libglew-dev libglfw3-dev libnetcdf-dev libmicrohttpd-dev | |
| sudo pip3 install build docutils lark-parser matplotlib netCDF4 numpy pytest scipy xarray | |
| if [ "${{ matrix.doc }}" = "yes" ]; then | |
| sudo apt-get install -y texlive texlive-latex-extra doxygen | |
| sudo pip3 install sphinx sphinx_rtd_theme sphinx-favicon | |
| fi | |
| - name: Setup (macOS) | |
| if: runner.os == 'macOS' | |
| run: | | |
| pkgutil --pkg-info=com.apple.pkg.CLTools_Executables | |
| brew upgrade python | |
| brew install libmicrohttpd | |
| sudo pip3 install build docutils lark-parser matplotlib netCDF4 numpy pytest scipy xarray | |
| if [ "${{ matrix.compiler }}" = "gcc" ]; then | |
| brew install gcc@${{ matrix.version }} | |
| echo "CC=gcc-${{ matrix.version }}" >> $GITHUB_ENV | |
| echo "CXX=g++-${{ matrix.version }}" >> $GITHUB_ENV | |
| elif [ "${{ matrix.compiler }}" = "clang" ]; then | |
| brew install llvm@${{ matrix.version }} | |
| echo "CC=/usr/local/opt/llvm@${{ matrix.version }}/bin/clang" >> $GITHUB_ENV | |
| echo "CXX=/usr/local/opt/llvm@${{ matrix.version }}/bin/clang++" >> $GITHUB_ENV | |
| if [ "${{ matrix.fortran }}" = "yes" ]; then | |
| brew install gcc@${{ matrix.fortran-version }} | |
| fi | |
| else | |
| exit 1 | |
| fi | |
| if [ "${{ matrix.fortran }}" = "yes" ]; then | |
| echo "FC=gfortran-${{ matrix.fortran-version }}" >> $GITHUB_ENV | |
| echo "USEFORTRAN=1" >> $GITHUB_ENV | |
| else | |
| echo "USEFORTRAN=0" >> $GITHUB_ENV | |
| fi | |
| brew install glew glfw netcdf | |
| - name: Configure (Linux / macOS) | |
| if: runner.os == 'Linux' || runner.os == 'macOS' | |
| run: | | |
| mkdir cmake-build | |
| cd cmake-build | |
| cmake -DCMAKE_BUILD_TYPE=${{ matrix.buildtype }} -DENABLE_PCH=1 -DENABLE_GUI=1 -DNUM_PYARTS_WSM=2 -DNUM_PYARTS_WSV=1 -DNUM_PYARTS_WSC=1 -DNUM_PYARTS_WSG=1 -DENABLE_FORTRAN=$USEFORTRAN -DENABLE_NETCDF=1 -DENABLE_DOCSERVER=1 -DENABLE_ARTS_LGPL=0 ${{ matrix.cmakeflags }} .. | |
| - name: Build (Linux) | |
| if: runner.os == 'Linux' && matrix.arts == 'yes' | |
| run: | | |
| cd cmake-build | |
| if [[ ${{ matrix.buildtype }} == "Release" ]]; then | |
| make -j2 -C src | |
| else | |
| make -j2 arts | |
| make -j1 pyarts | |
| make -j2 -C src | |
| fi | |
| - name: Build (macOS) | |
| if: runner.os == 'macOS' && matrix.arts == 'yes' | |
| run: | | |
| cd cmake-build | |
| make -j3 -C src | |
| - name: Docs (Linux / macOS) | |
| if: (runner.os == 'Linux' || runner.os == 'macOS') && matrix.doc == 'yes' | |
| run: | | |
| cd cmake-build | |
| make -j2 -C doc | |
| make -j2 pyarts_docs | |
| tar -zcf doxygen.tar.gz doc/doxygen/html | |
| tar -zcf sphinx.tar.gz python/doc/build | |
| - name: Check (Linux / macOS) | |
| if: (runner.os == 'Linux' || runner.os == 'macOS') && matrix.check == 'yes' | |
| run: | | |
| cd cmake-build | |
| make check | |
| - name: Python Wheel (Linux / macOS) | |
| if: (runner.os == 'Linux' || runner.os == 'macOS') && matrix.check == 'yes' | |
| run: | | |
| cd cmake-build | |
| make pyarts-package | |
| - name: Check Controlfile Conversion (Linux / macOS) | |
| if: matrix.check == 'yes' | |
| run: | | |
| cd cmake-build | |
| make check-conversion | |
| - uses: actions/upload-artifact@v4 | |
| if: (runner.os == 'Linux' || runner.os == 'macOS') && matrix.doc == 'yes' | |
| with: | |
| name: docs-uguide | |
| path: | | |
| cmake-build/doc/uguide/arts_user.pdf | |
| cmake-build/doc/uguide/arts_theory.pdf | |
| cmake-build/doc/uguide/arts_developer.pdf | |
| - uses: actions/upload-artifact@v4 | |
| if: (runner.os == 'Linux' || runner.os == 'macOS') && matrix.doc == 'yes' | |
| with: | |
| name: docs-doxygen | |
| path: | | |
| cmake-build/doxygen.tar.gz | |
| - uses: actions/upload-artifact@v4 | |
| if: (runner.os == 'Linux' || runner.os == 'macOS') && matrix.doc == 'yes' | |
| with: | |
| name: docs-sphinx | |
| path: | | |
| cmake-build/sphinx.tar.gz |