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Minor upgrade with summary
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@ay-lab ay-lab released this 26 Sep 02:05
· 113 commits to master since this release
5.1
50d8f1c

This release corresponds to the BiorXiv version, with the following upgrades:

  1. Creation of a summary .html file in the specified output directory. This summary file lists all the important output files the user should check, including the significant interactions. It also plots distribution of interactions according to the genomic distance, FDR thresholds, etc.

  2. Support for gzipped file in the validpairs input, matrix input (from HiC-pro) and also for the input peak file. It'll enable users to save storage space.

  3. Minor fix in the parsing configuration file routine.

  4. Minor modification in the spline and interaction plots.

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