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Fix for circular references #113

Merged
merged 3 commits into from
Aug 19, 2024
Merged

Fix for circular references #113

merged 3 commits into from
Aug 19, 2024

Commits on Aug 16, 2024

  1. Fix for circular contigs 

    * If all of the graph nodes have a degree of 2, no source/target nodes will be found, and currently no scaffolds will be assigned
* If this is detected, choose a minimizer node (smallest position in highest weight assembly), and make this the 'source' node
* Break the graph at incident edge, and continue the path determination
    @lcoombe
    lcoombe committed Aug 16, 2024
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  2. Fix for pylint

    @lcoombe
    lcoombe committed Aug 16, 2024
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  3. Remove python version pin from CI for mac

    @lcoombe
    lcoombe committed Aug 16, 2024
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