Merge pull request #2048 from heuermh/issue-2047

[ADAM-2047] Use source directory relative to project.basedir for adam codegen.
bigdatagenomics · Sep 12, 2018 · cb11b43 · cb11b43
2 parents f7c3b87 + 7aa2024
commit cb11b43
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/adam-core/pom.xml b/adam-core/pom.xml
@@ -114,7 +114,7 @@
                 <argument>org.bdgenomics.formats.avro.Variant</argument>
                 <argument>org.bdgenomics.formats.avro.VariantAnnotation</argument>
                 <argument>org.bdgenomics.formats.avro.VariantCallingAnnotations</argument>
-                <argument>adam-core/target/generated-sources/src/main/scala/org/bdgenomics/adam/sql/Schemas.scala</argument>
+                <argument>${project.basedir}/target/generated-sources/src/main/scala/org/bdgenomics/adam/sql/Schemas.scala</argument>
               </arguments>
               <classpathScope>compile</classpathScope>
             </configuration>
@@ -146,7 +146,7 @@
                 <argument>org.bdgenomics.formats.avro.Variant</argument>
                 <argument>org.bdgenomics.formats.avro.VariantAnnotation</argument>
                 <argument>org.bdgenomics.formats.avro.VariantCallingAnnotations</argument>
-                <argument>adam-core/target/generated-sources/src/main/scala/org/bdgenomics/adam/projections/Enums.scala</argument>
+                <argument>${project.basedir}/target/generated-sources/src/main/scala/org/bdgenomics/adam/projections/Enums.scala</argument>
               </arguments>
               <classpathScope>compile</classpathScope>
             </configuration>