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Support adding VCF header lines from Python #1840

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fnothaft opened this issue Dec 20, 2017 · 0 comments
Closed
3 tasks

Support adding VCF header lines from Python #1840

fnothaft opened this issue Dec 20, 2017 · 0 comments
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@fnothaft
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enhancement
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0.24.0

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  • Consolidate VCFHeaderLine code down into a single trait
  • Add functions to add filter/format/info lines
  • Expose said functions in Python
@fnothaft fnothaft added this to the 0.24.0 milestone Dec 20, 2017
@fnothaft fnothaft self-assigned this Dec 20, 2017
fnothaft added a commit to fnothaft/adam that referenced this issue Mar 1, 2018
@fnothaft
[ADAM-1840] Support adding VCF header lines from Python.
fca816a 
Resolves bigdatagenomics#1840. Split header line functionality out into VCFSupportingGenomicRDD
trait, which has a Scala/Java API for adding header lines. This is then mirrored
in Python.
@fnothaft fnothaft mentioned this issue Mar 1, 2018
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heuermh pushed a commit that referenced this issue Mar 5, 2018
@fnothaft @heuermh
[ADAM-1840] Support adding VCF header lines from Python.
fbc7218 
Resolves #1840. Split header line functionality out into VCFSupportingGenomicRDD
trait, which has a Scala/Java API for adding header lines. This is then mirrored
in Python.
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