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Improved README fix using feedback from other approach review. #1033

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InvisibleTech
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Took feedback from the other PR and used wildcard import to pick-up implicits needed to allow code sample shown in kmer.scala to work.

@AmplabJenkins
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Can one of the admins verify this patch?

@heuermh
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heuermh commented May 18, 2016

Jenkins, test this please.

.map(_.swap)
.sortByKey(ascending = false)
val kmers = reads.
flatMap(_.getSequence.sliding(21).map(k => (k, 1L))).
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I believe this could be left out of the commit -- I don't see any code changes here, and the style doesn't match the Scala coding style used in ADAM.

@AmplabJenkins
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Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/ADAM-prb/1234/
Test PASSed.

@InvisibleTech
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@heuermh so should I reformat the lines in question? - the only real fix was simply the import to get the implicit conversions working.

@fnothaft
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@InvisibleTech if you wouldn't mind, that would be great! If you're short on time, I can reformat those lines and manually merge tomorrow.

@InvisibleTech
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Sorry about not getting back to you - I assume you fixed the formatting issues. I have been apartment hunting as a part time job.

@fnothaft
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fnothaft commented Jun 1, 2016

No sweat, @InvisibleTech! I've just made the fix and merged this as 49e4bcf. Thanks for the PR, and best of luck with your apartment search!

@fnothaft fnothaft closed this Jun 1, 2016
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4 participants