[ADAM-1476] Treat . ALT allele as symbolic non-ref.
#1477
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Test PASSed. |
heuermh
reviewed
Apr 6, 2017
| @@ -182,31 +182,37 @@ class ADAMContextSuite extends ADAMFunSuite { | |||
| sparkTest("can read a gzipped .vcf file") { | |||
| val path = testFile("test.vcf.gz") | |||
| val vcs = sc.loadVcf(path) | |||
| assert(vcs.rdd.count === 6) | |||
| assert(vcs.rdd.count === 7) | |||
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were the compressed test resources changed too?
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Nope... they appear to have been a compressed version of the VCF file from Hadoop-BAM.
heuermh
approved these changes
Apr 6, 2017
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Thank you, @fnothaft! |
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Thank you! |
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Resolves #1476.