[ADAM-941] Automatically generate projection enums. #1547

fnothaft · 2017-05-24T08:28:53Z

Resolves #941. Depends on #1391.

AmplabJenkins · 2017-05-24T08:42:58Z

Test FAILed.
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Build result: FAILURE

[...truncated 15 lines...] > /home/jenkins/git2/bin/git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > /home/jenkins/git2/bin/git rev-parse origin/pr/1547/merge^{commit} # timeout=10 > /home/jenkins/git2/bin/git branch -a -v --no-abbrev --contains a002d7d264042d9fd03d04375e537f2138a89482 # timeout=10Checking out Revision a002d7d264042d9fd03d04375e537f2138a89482 (origin/pr/1547/merge) > /home/jenkins/git2/bin/git config core.sparsecheckout # timeout=10 > /home/jenkins/git2/bin/git checkout -f a002d7d264042d9fd03d04375e537f2138a89482First time build. Skipping changelog.Triggering ADAM-prb ? 2.3.0,2.11,2.0.0,centosTriggering ADAM-prb ? 2.6.0,2.11,1.6.1,centosTriggering ADAM-prb ? 2.6.0,2.11,2.0.0,centosTriggering ADAM-prb ? 2.6.0,2.10,1.6.1,centosTriggering ADAM-prb ? 2.6.0,2.10,2.0.0,centosTriggering ADAM-prb ? 2.3.0,2.11,1.6.1,centosTriggering ADAM-prb ? 2.3.0,2.10,1.6.1,centosTriggering ADAM-prb ? 2.3.0,2.10,2.0.0,centosADAM-prb ? 2.3.0,2.11,2.0.0,centos completed with result FAILUREADAM-prb ? 2.6.0,2.11,1.6.1,centos completed with result FAILUREADAM-prb ? 2.6.0,2.11,2.0.0,centos completed with result FAILUREADAM-prb ? 2.6.0,2.10,1.6.1,centos completed with result FAILUREADAM-prb ? 2.6.0,2.10,2.0.0,centos completed with result FAILUREADAM-prb ? 2.3.0,2.11,1.6.1,centos completed with result FAILUREADAM-prb ? 2.3.0,2.10,1.6.1,centos completed with result FAILUREADAM-prb ? 2.3.0,2.10,2.0.0,centos completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'
Test FAILed.

heuermh · 2017-05-24T12:50:56Z

This is pretty sweet :)

coveralls · 2017-05-24T15:38:13Z

Coverage decreased (-3.6%) to 78.45% when pulling b163e14 on fnothaft:issues/941-autogen-projection-enums into 2820e94 on bigdatagenomics:master.

AmplabJenkins · 2017-05-24T15:55:26Z

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AmplabJenkins · 2017-06-22T08:02:26Z

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Build result: FAILURE

[...truncated 15 lines...] > /home/jenkins/git2/bin/git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > /home/jenkins/git2/bin/git rev-parse origin/pr/1547/merge^{commit} # timeout=10 > /home/jenkins/git2/bin/git branch -a -v --no-abbrev --contains f0f153aeaca428139a810851f6046d1efe0b94f9 # timeout=10Checking out Revision f0f153aeaca428139a810851f6046d1efe0b94f9 (origin/pr/1547/merge) > /home/jenkins/git2/bin/git config core.sparsecheckout # timeout=10 > /home/jenkins/git2/bin/git checkout -f f0f153aeaca428139a810851f6046d1efe0b94f9First time build. Skipping changelog.Triggering ADAM-prb ? 2.6.0,2.11,1.6.1,centosTriggering ADAM-prb ? 2.3.0,2.11,2.0.0,centosTriggering ADAM-prb ? 2.6.0,2.11,2.0.0,centosTriggering ADAM-prb ? 2.6.0,2.10,2.0.0,centosTriggering ADAM-prb ? 2.3.0,2.11,1.6.1,centosTriggering ADAM-prb ? 2.6.0,2.10,1.6.1,centosTriggering ADAM-prb ? 2.3.0,2.10,1.6.1,centosTriggering ADAM-prb ? 2.3.0,2.10,2.0.0,centosADAM-prb ? 2.6.0,2.11,1.6.1,centos completed with result FAILUREADAM-prb ? 2.3.0,2.11,2.0.0,centos completed with result FAILUREADAM-prb ? 2.6.0,2.11,2.0.0,centos completed with result FAILUREADAM-prb ? 2.6.0,2.10,2.0.0,centos completed with result FAILUREADAM-prb ? 2.3.0,2.11,1.6.1,centos completed with result FAILUREADAM-prb ? 2.6.0,2.10,1.6.1,centos completed with result FAILUREADAM-prb ? 2.3.0,2.10,1.6.1,centos completed with result FAILUREADAM-prb ? 2.3.0,2.10,2.0.0,centos completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'
Test FAILed.

AmplabJenkins · 2017-06-24T04:01:20Z

Test FAILed.
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Build result: FAILURE

[...truncated 15 lines...] > /home/jenkins/git2/bin/git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > /home/jenkins/git2/bin/git rev-parse origin/pr/1547/merge^{commit} # timeout=10 > /home/jenkins/git2/bin/git branch -a -v --no-abbrev --contains f9803ae0687eb626fb4932cd13c45cced7f9dc6e # timeout=10Checking out Revision f9803ae0687eb626fb4932cd13c45cced7f9dc6e (origin/pr/1547/merge) > /home/jenkins/git2/bin/git config core.sparsecheckout # timeout=10 > /home/jenkins/git2/bin/git checkout -f f9803ae0687eb626fb4932cd13c45cced7f9dc6eFirst time build. Skipping changelog.Triggering ADAM-prb ? 2.3.0,2.10,1.6.1,centosTriggering ADAM-prb ? 2.6.0,2.11,1.6.1,centosTriggering ADAM-prb ? 2.6.0,2.10,2.0.0,centosTriggering ADAM-prb ? 2.6.0,2.10,1.6.1,centosTriggering ADAM-prb ? 2.6.0,2.11,2.0.0,centosTriggering ADAM-prb ? 2.3.0,2.11,1.6.1,centosTriggering ADAM-prb ? 2.3.0,2.11,2.0.0,centosTriggering ADAM-prb ? 2.3.0,2.10,2.0.0,centosADAM-prb ? 2.3.0,2.10,1.6.1,centos completed with result FAILUREADAM-prb ? 2.6.0,2.11,1.6.1,centos completed with result FAILUREADAM-prb ? 2.6.0,2.10,2.0.0,centos completed with result FAILUREADAM-prb ? 2.6.0,2.10,1.6.1,centos completed with result FAILUREADAM-prb ? 2.6.0,2.11,2.0.0,centos completed with result FAILUREADAM-prb ? 2.3.0,2.11,1.6.1,centos completed with result FAILUREADAM-prb ? 2.3.0,2.11,2.0.0,centos completed with result FAILUREADAM-prb ? 2.3.0,2.10,2.0.0,centos completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'
Test FAILed.

coveralls · 2017-06-26T03:02:54Z

Coverage decreased (-0.2%) to 82.868% when pulling 2d01f94 on fnothaft:issues/941-autogen-projection-enums into 0306717 on bigdatagenomics:master.

AmplabJenkins · 2017-06-26T03:10:45Z

Test PASSed.
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fnothaft · 2017-07-11T03:57:56Z

Rebased.

devin-petersohn

Looks great!

devin-petersohn · 2017-07-11T04:20:04Z

adam-codegen/src/main/scala/org/bdgenomics/adam/codegen/DumpSchemasToProjectionEnums.scala

+ }
+
+ private def writeHeader(fw: FileWriter, packageName: String) {
+ val hdr = Seq(


Can this header be factored out now to a separate package object?

Yeah, that'd be reasonable. Let me do that real quick.

coveralls · 2017-07-11T04:35:43Z

Coverage increased (+0.01%) to 84.033% when pulling e5f265f on fnothaft:issues/941-autogen-projection-enums into 97a8498 on bigdatagenomics:master.

AmplabJenkins · 2017-07-11T04:44:03Z

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Resolves bigdatagenomics#941.

fnothaft · 2017-07-11T06:03:53Z

Rebased and factored out header writer. Good to go from my side.

coveralls · 2017-07-11T06:18:29Z

Coverage increased (+0.1%) to 84.092% when pulling 8221773 on fnothaft:issues/941-autogen-projection-enums into 467db1f on bigdatagenomics:master.

AmplabJenkins · 2017-07-11T06:30:14Z

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Test PASSed.

heuermh · 2017-07-11T06:32:04Z

Thank you, @fnothaft

fnothaft added this to the 0.23.0 milestone May 24, 2017

fnothaft force-pushed the issues/941-autogen-projection-enums branch from 9d460cf to b163e14 Compare May 24, 2017 15:22

fnothaft force-pushed the issues/941-autogen-projection-enums branch from b163e14 to cec9560 Compare June 22, 2017 07:48

fnothaft force-pushed the issues/941-autogen-projection-enums branch from cec9560 to 1cf095d Compare June 24, 2017 03:48

fnothaft force-pushed the issues/941-autogen-projection-enums branch from 1cf095d to 2d01f94 Compare June 26, 2017 02:52

fnothaft force-pushed the issues/941-autogen-projection-enums branch from 2d01f94 to e5f265f Compare July 11, 2017 03:57

devin-petersohn approved these changes Jul 11, 2017

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[ADAM-941] Automatically generate projection enums.

8221773

Resolves bigdatagenomics#941.

fnothaft force-pushed the issues/941-autogen-projection-enums branch from e5f265f to 8221773 Compare July 11, 2017 06:03

heuermh merged commit 324ae74 into bigdatagenomics:master Jul 11, 2017

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[ADAM-941] Automatically generate projection enums. #1547

[ADAM-941] Automatically generate projection enums. #1547

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[ADAM-941] Automatically generate projection enums. #1547

[ADAM-941] Automatically generate projection enums. #1547

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