[ADAM-2266] Default build to Spark 3/Scala 2.12 #2268
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains 71c8cf0 # timeout=10Checking out Revision 71c8cf0 (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f 71c8cf0519506491ad54ff38603a2cb65d1df17aFirst time build. Skipping changelog.Triggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuTriggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains 0d518e1 # timeout=10Checking out Revision 0d518e1 (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f 0d518e1c6885f93ce20ca5ed3acb896c9a123af4First time build. Skipping changelog.Triggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result SUCCESSADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result SUCCESSNotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Jenkins, retest this please |
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains 0d518e1 # timeout=10Checking out Revision 0d518e1 (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f 0d518e1c6885f93ce20ca5ed3acb896c9a123af4First time build. Skipping changelog.Triggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result SUCCESSNotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains 956681c # timeout=10Checking out Revision 956681c (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f 956681ce6d9dd848d1e676096770f8a914b3e429First time build. Skipping changelog.Triggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result SUCCESSNotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains e784e3f # timeout=10Checking out Revision e784e3f (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f e784e3f9c54a2759017edf39e0e26a2e7c346470First time build. Skipping changelog.Triggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Jenkins, retest this please |
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains e784e3f # timeout=10Checking out Revision e784e3f (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f e784e3f > git rev-list e784e3f # timeout=10Triggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result SUCCESSNotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains c6bb17b # timeout=10Checking out Revision c6bb17b (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f c6bb17b > git rev-list e784e3f # timeout=10Triggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Jenkins, retest this please |
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Test PASSed. |
heuermh
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Test FAILed. Build result: FAILURE[...truncated 5 lines...]Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/adam.git > git init /home/jenkins/workspace/ADAM-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/adam.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/adam.git > git fetch --tags --progress https://github.com/bigdatagenomics/adam.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/2268/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains 2b508ae # timeout=10Checking out Revision 2b508ae (origin/pr/2268/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f 2b508ae > git rev-list c6bb17b # timeout=10Triggering ADAM-prb ? 2.7.5,2.11,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,2.4.6,ubuntuTriggering ADAM-prb ? 2.7.5,2.12,3.0.0,ubuntuADAM-prb ? 2.7.5,2.11,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,2.4.6,ubuntu completed with result FAILUREADAM-prb ? 2.7.5,2.12,3.0.0,ubuntu completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
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Jenkins, retest this please |
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Test PASSed. |
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Fixes #2266