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Adding reference assembly name to ADAMContig. #262

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merged 1 commit into from
Jun 8, 2014

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fnothaft
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@fnothaft fnothaft commented Jun 8, 2014

Adds the reference assembly name to ADAMContig. Also, cleans up conversion to/from SAMReferenceRecord, to ensure that we are properly converting assembly/species/etc. fields back to SAM.

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All automated tests passed.
Refer to this link for build results: https://amplab.cs.berkeley.edu/jenkins/job/ADAM-prb/353/

tdanford added a commit that referenced this pull request Jun 8, 2014
Adding reference assembly name to ADAMContig.
@tdanford tdanford merged commit 15fe503 into bigdatagenomics:master Jun 8, 2014
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tdanford commented Jun 8, 2014

Thanks, Frank!

@fnothaft fnothaft deleted the add-assembly-to-contig branch July 10, 2014 13:15
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