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Fix for travis build, reads2ref was renamed reads2reference #950

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Fix for travis build, reads2ref was renamed reads2reference #950

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2 changes: 1 addition & 1 deletion scripts/jenkins-test
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Expand Up @@ -60,7 +60,7 @@ rm -rf "$SORTED_READS"
"$ADAM" transform -sort_reads "$READS" "$SORTED_READS"
echo "Converting read file to pileup format"
rm -rf "$PILEUPS"
"$ADAM" reads2ref "$READS" "$PILEUPS"
"$ADAM" reads2reference "$READS" "$PILEUPS"
echo "Reading reads"
"$ADAM" print "$READS" 1>/dev/null 2>/dev/null
"$ADAM" flagstat "$READS"
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