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Add SAM record converters, VCF record converter API classes #71

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merged 2 commits into from
Dec 3, 2019

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heuermh
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@heuermh heuermh commented Apr 15, 2019

Fixes #18

VCF record converters will be implemented later to satisfy #78.

@akmorrow13
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Hi @heuermh is there anything you need from me on this? We would like to move bigdatagenomics/mango#494 along

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heuermh commented Jun 6, 2019

How about a review on bigdatagenomics/adam#1895 in trade ;)

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heuermh commented Jun 6, 2019

Looks like I still need to add some real-life unit tests, with some roundtripping, then this will be ready for review.

@heuermh heuermh added this to the 0.7.0 milestone Jul 2, 2019
@heuermh heuermh modified the milestones: 0.7.0, 0.8.0 Jul 5, 2019
@heuermh heuermh modified the milestones: 0.8.0, 0.9.0 Sep 19, 2019
@heuermh heuermh changed the title Adding SAM record converters, work in progress Add SAM record converters, VCF record converter API classes Dec 3, 2019
@heuermh heuermh marked this pull request as ready for review December 3, 2019 15:42
@heuermh heuermh merged commit dd2ac21 into bigdatagenomics:master Dec 3, 2019
@heuermh heuermh deleted the sam-record branch December 3, 2019 15:42
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Variant and Genotype converters will need VCF header
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