Test and Dependencies pre-valiation (branch 0.6.x)

.dockerignore

@@ -24,6 +24,7 @@ Makefile.config
 # Unit test / Coverage reports
 **/*.cache
 **/*.coverage
+**/coverage.*
 **/*.pytest_cache
 **/*.tox
 **/nosetests.xml

.github/ISSUE_TEMPLATE/bug-report.md

@@ -0,0 +1,39 @@
+---
+
+name: Bug Report
+about: Create a report to describe a problem
+labels: triage/bug
+assignees: cehbrecht
+
+---
+
+## Describe the bug
+
+<!-- A clear and concise description of what the bug is. -->
+
+## To Reproduce
+
+<!-- 
+Steps to reproduce the behavior:
+1. Deploy process with payload '...'
+2. Execute using payload '....'
+3. Result '....'
+4. Error message '...'
+5. etc.
+-->
+
+## Expected behavior
+
+<!-- A clear and concise description of what you expected to happen. -->
+
+## Context
+
+<!-- 
+    If applicable, add screenshots or drag-drop files to help explain your problem.
+    Also, please complete the following information.
+-->
+
+- OS: \[e.g. Linux|Windows] (if running locally)
+- Browser \[e.g. chrome, safari] (if running as a service)
+- Instance: \[ADES|EMS|Hybrid] and URL
+- Version \["1.2.3", see `/versions` endpoint]

.github/ISSUE_TEMPLATE/feature-request.md

@@ -0,0 +1,27 @@
+---
+
+name: Feature Request
+about: Suggest an idea for this project
+labels: triage/feature
+assignees: cehbrecht
+
+---
+
+## Description
+
+<!-- 
+
+- Is your feature request related to a missing implementation or functionality?
+- What is the expected solution or behaviour?
+- Describe alternative approaches you have considered.
+
+-->
+
+## References
+
+<!-- 
+Provide any external references or similar issue links here.
+
+- issue #<issue-number>
+- external https://link
+-->

.github/PULL_REQUEST_TEMPLATE/pull-request-template.md

@@ -0,0 +1,27 @@
+---
+
+name: Pull Request
+about: Create a pull request to resolve issues or add new features.
+
+---
+
+## Changes
+
+<!-- Provide a summary of changes.
+- ...
+- ...
+-->
+
+## Features and Fixes
+
+<!--
+Add any applicable references. 
+
+- Fixes #<issue number>
+- Relates to #<issue number>
+-->
+
+## Checklist
+
+- [ ] Included fixes and related issue references in changes.
+- [ ] Tests added/updated to validate fixes and/or new features.

.github/workflows/tests.yml

@@ -0,0 +1,100 @@
+# run test suites
+
+name: Tests
+on:
+  - pull_request
+  - push
+  - release
+  - workflow_dispatch
+
+jobs:
+  # see: https://github.com/fkirc/skip-duplicate-actions
+  skip_duplicate:
+    continue-on-error: true
+    runs-on: ubuntu-latest
+    outputs:
+      should_skip: ${{ steps.skip_check.outputs.should_skip && ! contains(github.ref, 'refs/tags') }}
+    steps:
+      - id: skip_check
+        uses: fkirc/skip-duplicate-actions@master
+        with:
+          concurrent_skipping: "same_content_newer"
+          skip_after_successful_duplicate: "true"
+          do_not_skip: '["pull_request", "workflow_dispatch", "schedule", "release"]'
+
+  # see: https://github.com/actions/setup-python
+  tests:
+    # FIXME: https://github.com/fkirc/skip-duplicate-actions/issues/90
+    #   disable for now because the tests never run... somehow similar config works in Magpie...
+    # needs: skip_duplicate
+    # if: ${{ needs.skip_duplicate.outputs.should_skip != 'true' }}
+    runs-on: ${{ matrix.os }}
+    continue-on-error: ${{ matrix.allow-failure }}
+    env:
+      # override make command to install directly in active python
+      CONDA_CMD: ""
+    services:
+      # Label used to access the service container
+      mongodb:
+        image: mongo:3.4.23  # DockerHub
+        ports:
+          - "27017:27017"
+    strategy:
+      matrix:
+        os: [ubuntu-latest]
+        python-version: ["3.6", "3.7", "3.8"]
+        allow-failure: [false]
+        test-case: [test-local]
+        include:
+          # linter tests
+          - os: ubuntu-latest
+            python-version: 3.7
+            allow-failure: false
+            test-case: lint
+          # coverage test
+          - os: ubuntu-latest
+            python-version: 3.7
+            allow-failure: false
+            test-case: coverage
+          # smoke test of Docker image
+          - os: ubuntu-latest
+            python-version: None  # doesn't matter which one (in docker), but match default of repo
+            allow-failure: false
+            test-case: docker-test
+    steps:
+      - uses: actions/checkout@v2
+        with:
+          fetch-depth: "0"
+      - name: Setup Python
+        uses: actions/setup-python@v2
+        if: ${{ matrix.python-version != 'None' }}
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install Dependencies
+        if: ${{ matrix.python-version != 'None' }}
+        # install package and dependencies directly,
+        # skip sys/conda setup to use active python
+        run: make install develop
+      - name: Display Packages
+        if: ${{ matrix.python-version != 'None' }}
+        run: pip freeze
+      #- name: Setup Environment Variables
+      #  uses: c-py/action-dotenv-to-setenv@v2
+      #  with:
+      #    env-file: ./ci/weaver.env
+      - name: Display Environment Variables
+        run: |
+          hash -r
+          env | sort
+      - name: Run Tests
+        run: make --no-keep-going ${{ matrix.test-case }}
+      - name: Stop Workers
+        if: ${{ matrix.python-version == 'None' }}
+        run: make docker-stop
+      - name: Upload coverage report
+        uses: codecov/codecov-action@v1
+        if: ${{ success() && matrix.test-case == 'coverage' }}
+        with:
+          files: ./coverage/coverage.xml
+          fail_ci_if_error: true
+          verbose: true

.gitignore

@@ -21,6 +21,7 @@ __pycache__
 nosetests.xml
 unit_tests/testdata.json
 coverage/
+coverage.*
 
 # R
 *.Rhistory