Merge pull request #228 from ccmbioinfo/greenDB

add GreenDB annotation
ccmbioinfo · Jul 19, 2024 · c899de4 · c899de4
2 parents 1305b2c + 92b6f2c
commit c899de4
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/vcfanno/crg.vcfanno_hg38.conf b/vcfanno/crg.vcfanno_hg38.conf
@@ -184,3 +184,9 @@ columns = [9]
 names = ["AlphaMissense"]
 ops=["first"]
 
+#GreenDB
+[[annotation]]
+file="GRCh38_GREEN-DB.bed.gz"
+columns = [5,9,13]
+names = ["GreenDB_variant_type", "GreenDB_closest_gene", "GreenDB_controlled_gene"]
+ops=["self", "self", "self"]