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Insertion counts are wrong #524

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donkirkby opened this issue Jan 22, 2020 · 1 comment
Closed

Insertion counts are wrong #524

donkirkby opened this issue Jan 22, 2020 · 1 comment

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@donkirkby
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The insertion reads listed in conseq_ins.csv aren't sorted by region, but aln2counts.py assumes they are, so it only counts the last group of insertions for each region.

@donkirkby donkirkby added the bug label Jan 22, 2020
@donkirkby donkirkby added this to the 7.12 - De Novo Assembly milestone Jan 22, 2020
@donkirkby
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Fixed in commit 34a5c35.

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