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Move all landscapes stuff to landscapes.py
Python application #193: Commit 0925e73 pushed by Donaim
July 9, 2024 23:47 1m 30s hivintact-final-results
July 9, 2024 23:47 1m 30s
Fix defect column value for intact sequences
Python application #192: Commit c1698b4 pushed by Donaim
July 9, 2024 23:00 1m 31s hivintact-final-results
July 9, 2024 23:00 1m 31s
Add a separate proviral_landscapes.py script
Python application #191: Commit 3d53ae8 pushed by Donaim
July 9, 2024 21:04 1m 41s hivintact-final-results
July 9, 2024 21:04 1m 41s
Add a separate proviral_landscapes.py script
Python application #190: Commit 36f83e4 pushed by Donaim
July 9, 2024 21:03 32s hivintact-final-results
July 9, 2024 21:03 32s
Small refactoring of utils.py
Python application #189: Commit 49022e0 pushed by Donaim
July 9, 2024 21:03 1m 37s hivintact-final-results
July 9, 2024 21:03 1m 37s
Improve reading of .SAM files
Python application #188: Commit 05aac4f pushed by Donaim
July 9, 2024 18:51 1m 36s hivintact-final-results
July 9, 2024 18:51 1m 36s
Fix column name of CFEIntact errors.csv
Python application #187: Commit 1819951 pushed by Donaim
July 9, 2024 17:56 1m 32s hivintact-final-results
July 9, 2024 17:56 1m 32s
Do not install cfeintact twice
Python application #186: Commit 514221c pushed by Donaim
July 8, 2024 23:52 1m 28s hivintact-final-results
July 8, 2024 23:52 1m 28s
Use CFEIntact's python API instead of operating system's shell
Python application #185: Commit bc1d1ea pushed by Donaim
July 8, 2024 23:52 1m 31s hivintact-final-results
July 8, 2024 23:52 1m 31s
Bump CFEIntact version
Python application #184: Commit 2345afa pushed by Donaim
July 8, 2024 23:44 1m 33s hivintact-final-results
July 8, 2024 23:44 1m 33s
Update cfeintact command
Python application #183: Commit 3a0bf9d pushed by Donaim
July 8, 2024 22:01 1m 27s hivintact-final-results
July 8, 2024 22:01 1m 27s
Update Pipfile.lock
Python application #182: Commit 1c5eca6 pushed by Donaim
July 8, 2024 21:57 1m 31s hivintact-final-results
July 8, 2024 21:57 1m 31s
Update Pipfile.lock
Python application #181: Commit 5283b3a pushed by Donaim
July 8, 2024 21:16 35s hivintact-final-results
July 8, 2024 21:16 35s
Switch to CFEIntact
Python application #180: Commit 9d725a1 pushed by Donaim
July 8, 2024 21:08 1m 44s hivintact-final-results
July 8, 2024 21:08 1m 44s
Switch to CFEIntact
Python application #179: Commit e901f0d pushed by Donaim
July 8, 2024 21:05 41s hivintact-final-results
July 8, 2024 21:05 41s
Various code improvements
Python application #178: Commit 95ae330 pushed by Donaim
March 7, 2024 06:19 1m 38s hivintact-final-results
March 7, 2024 06:19 1m 38s
Merge pull request #21 from cfe-lab/ubuntu1
Python application #177: Commit 9044145 pushed by Donaim
March 7, 2024 03:39 1m 12s master
March 7, 2024 03:39 1m 12s
Singularity: remove temporary files after the build is finished
Python application #176: Commit caa4d55 pushed by Donaim
March 7, 2024 03:36 1m 13s ubuntu1
March 7, 2024 03:36 1m 13s
fix the check for when to use HIVSeqinR results
Python application #175: Commit 5367241 pushed by Donaim
March 7, 2024 02:27 1m 33s hivintact-final-results
March 7, 2024 02:27 1m 33s
Add missing codes to the HIVINACT_ERRORS_TABLE
Python application #174: Commit 120fe49 pushed by Donaim
March 6, 2024 01:45 1m 48s hivintact-final-results
March 6, 2024 01:45 1m 48s
Fix table precursor construction
Python application #173: Commit 775f100 pushed by Donaim
March 6, 2024 01:44 1m 38s hivintact-final-results
March 6, 2024 01:44 1m 38s
Do not translate HIVIntact errors to HIVSeqinR ones
Python application #172: Commit eae7b0f pushed by Donaim
March 6, 2024 01:44 1m 36s hivintact-final-results
March 6, 2024 01:44 1m 36s
Bump HIVIntact from 1.3 to 1.4
Python application #171: Commit 56d06d9 pushed by Donaim
March 6, 2024 01:44 1m 30s hivintact-final-results
March 6, 2024 01:44 1m 30s
Rename "hivseqinr_results_tar" argument to "detailed_results_tar"
Python application #170: Commit 5c378e9 pushed by Donaim
March 6, 2024 01:44 1m 29s hivintact-final-results
March 6, 2024 01:44 1m 29s
Switch to csv outputs in HIVIntact
Python application #169: Commit a1294df pushed by Donaim
March 6, 2024 01:44 1m 46s hivintact-final-results
March 6, 2024 01:44 1m 46s