AttributeError: 'str' object has no attribute 'copy' when combining specs.
#5416
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source::anaconda
created by members of Anaconda, Inc.
type::bug
describes erroneous operation, use severity::* to classify the type
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danpetry
added
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type::bug
|
Came here to open this! I'm encountering the issue when testing in bioconda. My conda-build version: 24.5.1 I've modified the code that errors to workaround the issue. Replace line 332 with: if type(v) == str:
values[k] = v
else:
values[k] = v.copy()I've also found out what the root cause is by printing: v='16'
k='cxx_compiler_version'
values={'perl': ['5.32.1'], 'lua': ['5'], 'r_base': ['4.3.*'], 'cpu_optimization_target': ['nocona'], 'pin_run_as_build': {'python': {'max_pin': 'x.x', 'min_pin': 'x.x'}, 'r-base': {'max_pin': 'x.x', 'min_pin': 'x.x'}, 'flann': {'max_pin': 'x.x.x'}, 'graphviz': {'max_pin': 'x'}, 'libsvm': {'max_pin': 'x'}, 'netcdf-cxx4': {'max_pin': 'x.x'}, 'occt': {'max_pin': 'x.x'}, 'poppler': {'max_pin': 'x.x'}, 'vlfeat': {'max_pin': 'x.x.x'}}, 'ignore_version': [], 'ignore_build_only_deps': ['numpy', 'python'], 'extend_keys': ['pin_run_as_build', 'extend_keys', 'ignore_build_only_deps', 'ignore_version'], 'cran_mirror': ['https://cran.r-project.org'], 'target_platform': ['osx-arm64'], 'c_compiler': ['clang'], 'cxx_compiler': ['clangxx'], 'fortran_compiler': ['gfortran'], 'MACOSX_DEPLOYMENT_TARGET': ['11.0'], 'VERBOSE_AT': ['V=1'], 'VERBOSE_CM': ['VERBOSE=1'], '_libgcc_mutex': ['0.1 conda_forge'], 'abseil_cpp': ['20220623.0'], 'alsa_lib': ['1.2'], 'antic': ['0.2'], 'aom': ['3.8'], 'arb': ['2.23'], 'arpack': ['3.8'], 'arrow_cpp': ['15'], 'libarrow': ['15'], 'libarrow_all': ['15'], 'assimp': ['5.3.1'], 'attr': ['2.5'], 'aws_c_auth': ['0.7.22'], 'aws_c_cal': ['0.6.14'], 'aws_c_common': ['0.9.19'], 'aws_c_compression': ['0.2.18'], 'aws_c_event_stream': ['0.4.2'], 'aws_c_http': ['0.8.1'], 'aws_c_io': ['0.14.8'], 'aws_c_mqtt': ['0.10.4'], 'aws_c_s3': ['0.5.9'], 'aws_c_sdkutils': ['0.1.16'], 'aws_checksums': ['0.1.18'], 'aws_crt_cpp': ['0.26.9'], 'aws_sdk_cpp': ['1.11.267'], 'bamtools': ['2.5.2'], 'blas_impl': ['openblas'], 'bullet_cpp': ['3.25'], 'bzip2': ['1'], 'c_ares': ['1'], 'c_blosc2': ['2.14'], 'c_compiler_version': ['16'], 'cxx_compiler_version': ['16'], 'fortran_compiler_version': ['12'], 'c_stdlib': ['macosx_deployment_target'], 'c_stdlib_version': ['11.0'], 'cairo': ['1'], 'capnproto': ['1.0.2'], 'ccr': ['1.3'], 'cfitsio': ['4.3.0'], 'cgo_compiler': ['go-cgo'], 'channel_sources': ['conda-forge,bioconda'], 'channel_targets': ['bioconda main'], 'coin_or_cbc': ['2.10'], 'coin_or_cgl': ['0.60'], 'coin_or_clp': ['1.17'], 'coin_or_osi': ['0.108'], 'coin_or_utils': ['2.11'], 'coincbc': ['2.10'], 'console_bridge': ['1.0'], 'cuda_compiler': ['None'], 'cuda_compiler_version': ['None'], 'cuda_compiler_version_min': ['None'], 'cudnn': ['8'], 'curl': ['8'], 'cutensor': ['2'], 'dav1d': ['1.2.1'], 'davix': ['0.8'], 'dbus': ['1'], 'dcap': ['2.47'], 'eclib': ['20231211'], 'elfutils': ['0.191'], 'exiv2': ['0.28'], 'expat': ['2'], 'ffmpeg': ['6'], 'fftw': ['3'], 'flann': ['1.9.2'], 'flatbuffers': ['24.3.25'], 'fmt': ['10'], 'fontconfig': ['2'], 'freetype': ['2'], 'gct': ['6.2.1705709074'], 'gdal': ['3.8'], 'gdk_pixbuf': ['2'], 'geos': ['3.12.1'], 'geotiff': ['1.7.1'], 'gf2x': ['1.3'], 'gfal2': ['2.22'], 'gflags': ['2.2'], 'giflib': ['5.2'], 'glew': ['2.1'], 'glib': ['2'], 'glog': ['0.6'], 'glpk': ['5.0'], 'gmp': ['6'], 'gnuradio_core': ['3.10.10'], 'gnutls': ['3.7'], 'go_compiler': ['go-nocgo'], 'google_cloud_cpp': ['2.24'], 'google_cloud_cpp_common': ['0.25.0'], 'googleapis_cpp': ['0.10'], 'graphviz': ['9'], 'grpc_cpp': ['1.52'], 'gsl': ['2.7'], 'gsoap': ['2.8.123'], 'gst_plugins_base': ['1.22'], 'gstreamer': ['1.22'], 'harfbuzz': ['8'], 'hdf4': ['4.2.15'], 'hdf5': ['1.14.3'], 'icu': ['73'], 'idyntree': ['12'], 'imath': ['3.1.11'], 'ipopt': ['3.14.16'], 'isl': ['0.26'], 'jasper': ['4'], 'jpeg': ['9'], 'json_c': ['0.17'], 'jsoncpp': ['1.9.5'], 'kealib': ['1.5'], 'krb5': ['1.21'], 'lcms2': ['2'], 'ldas_tools_framecpp': ['2.9'], 'lerc': ['4'], 'libabseil': ['20240116'], 'libabseil_static': ['20220623.0'], 'libaec': ['1'], 'libarchive': ['3.7'], 'libavif': ['1'], 'libblas': ['3.9 *netlib'], 'libblitz': ['1.0.2'], 'libboost_devel': ['1.82'], 'libboost_python_devel': ['1.82'], 'libcblas': ['3.9 *netlib'], 'libcint': ['5.5'], 'libcrc32c': ['1.1'], 'libcurl': ['8'], 'libdap4': ['3.20.6'], 'libdeflate': ['1.20'], 'libduckdb_devel': ['0.9.2'], 'libeantic': ['2'], 'libev': ['4.33'], 'libevent': ['2.1.12'], 'libexactreal': ['4'], 'libffi': ['3.4'], 'libflatsurf': ['3'], 'libflint': ['2.9'], 'libframel': ['8.41'], 'libgdal': ['3.8'], 'libgit2': ['1.8'], 'libgoogle_cloud': ['2.24'], 'libgoogle_cloud_aiplatform_devel': ['2.24'], 'libgoogle_cloud_all_devel': ['2.24'], 'libgoogle_cloud_automl_devel': ['2.24'], 'libgoogle_cloud_bigquery_devel': ['2.24'], 'libgoogle_cloud_bigtable_devel': ['2.24'], 'libgoogle_cloud_compute_devel': ['2.24'], 'libgoogle_cloud_devel': ['2.24'], 'libgoogle_cloud_dialogflow_cx_devel': ['2.24'], 'libgoogle_cloud_dialogflow_es_devel': ['2.24'], 'libgoogle_cloud_discoveryengine_devel': ['2.24'], 'libgoogle_cloud_dlp_devel': ['2.24'], 'libgoogle_cloud_iam_devel': ['2.24'], 'libgoogle_cloud_oauth2_devel': ['2.24'], 'libgoogle_cloud_policytroubleshooter_devel': ['2.24'], 'libgoogle_cloud_pubsub_devel': ['2.24'], 'libgoogle_cloud_spanner_devel': ['2.24'], 'libgoogle_cloud_speech_devel': ['2.24'], 'libgoogle_cloud_storage_devel': ['2.24'], 'libgrpc': ['1.62'], 'libhugetlbfs': ['2'], 'libhwloc': ['2.10.0'], 'libhwy': ['1.1'], 'libiconv': ['1'], 'libidn2': ['2'], 'libiio': ['0'], 'libintervalxt': ['3'], 'libjpeg_turbo': ['3'], 'libkml': ['1.3'], 'liblapack': ['3.9 *netlib'], 'liblapacke': ['3.9 *netlib'], 'libmatio': ['1.5.26'], 'libmatio_cpp': ['0.2.5'], 'libmed': ['4.1'], 'libmicrohttpd': ['1.0'], 'libnetcdf': ['4.9.2'], 'libode': ['0.16.2'], 'libopencv': ['4.9.0'], 'libopentelemetry_cpp': ['1.15'], 'libopenvino_dev': ['2024.1.0'], 'libosqp': ['0.6.3'], 'libpcap': ['1.10'], 'libpng': ['1.6'], 'libpq': ['16'], 'libprotobuf': ['4.25.3'], 'libptscotch': ['7.0.4'], 'libraw': ['0.21'], 'librdkafka': ['2.4'], 'librsvg': ['2'], 'libscotch': ['7.0.4'], 'libsecret': ['0.18'], 'libsentencepiece': ['0.2.0'], 'libsndfile': ['1.2'], 'libsoup': ['3'], 'libspatialindex': ['1.9.3'], 'libsqlite': ['3'], 'libssh': ['0.10'], 'libssh2': ['1'], 'libsvm': ['332'], 'libtensorflow': ['2.15'], 'libtensorflow_cc': ['2.15'], 'libthrift': ['0.20.0'], 'libtiff': ['4.6'], 'libtorch': ['2.1'], 'libunwind': ['1.6'], 'libuuid': ['2'], 'libv8': ['8.9.83'], 'libvips': ['8'], 'libwebp': ['1'], 'libwebp_base': ['1'], 'libxml2': ['2'], 'libxsmm': ['1'], 'libyarp': ['3.9.0'], 'libzip': ['1'], 'llvm_openmp': ['16'], 'lmdb': ['0.9.29'], 'log4cxx': ['1.2.0'], 'lz4_c': ['1.9.3'], 'lzo': ['2'], 'macos_machine': ['arm64-apple-darwin20.0.0'], 'metis': ['5.1.0'], 'mimalloc': ['2.1.7'], 'mkl': ['2023'], 'mkl_devel': ['2023'], 'mpfr': ['4'], 'mpg123': ['1.32'], 'mpich': ['4'], 'msgpack_c': ['6'], 'msgpack_cxx': ['6'], 'mumps_mpi': ['5.7.1'], 'mumps_seq': ['5.7.1'], 'nccl': ['2'], 'ncurses': ['6'], 'netcdf_cxx4': ['4.3'], 'netcdf_fortran': ['4.6'], 'nettle': ['3.9'], 'nlopt': ['2.7'], 'nodejs': ['20'], 'nspr': ['4'], 'nss': ['3'], 'ntl': ['11.4.3'], 'python': ['3.11.* *_cpython'], 'numpy': ['1.23'], 'python_impl': ['cpython'], 'occt': ['7.7.2'], 'openblas': ['0.3.*'], 'openexr': ['3.2'], 'openh264': ['2.4.1'], 'openjpeg': ['2'], 'openmpi': ['4'], 'openslide': ['4'], 'openssl': ['3'], 'orc': ['2.0.1'], 'p11_kit': ['0.24'], 'pango': ['1.50'], 'pari': ['2.15.* *_pthread'], 'pcl': ['1.14.0'], 'pcre': ['8'], 'pcre2': ['10.43'], 'petsc': ['3.21'], 'petsc4py': ['3.21'], 'pixman': ['0'], 'poco': ['1.13.3'], 'poppler': ['24.04'], 'postgresql': ['16'], 'postgresql_plpython': ['16'], 'proj': ['9.3.1'], 'ptscotch': ['7.0.4'], 'pugixml': ['1.14'], 'pulseaudio': ['17.0'], 'pulseaudio_client': ['17.0'], 'pulseaudio_daemon': ['17.0'], 'pybind11_abi': ['4'], 'pyqt': ['5.15'], 'pyqtchart': ['5.15'], 'pyqtwebengine': ['5.15'], 'pytorch': ['2.1'], 'qt': ['5.15'], 'qt6_main': ['6.7'], 'qt_main': ['5.15'], 'qtkeychain': ['0.14'], 'rdma_core': ['51'], 're2': ['2023.09.01'], 'readline': ['8'], 'rocksdb': ['9.1'], 'root_base': ['6.28.10'], 'ruby': ['2.5'], 'rust_compiler': ['rust'], 's2n': ['1.4.15'], 'scotch': ['7.0.4'], 'sdl2': ['2'], 'sdl2_image': ['2'], 'sdl2_mixer': ['2'], 'sdl2_net': ['2'], 'sdl2_ttf': ['2'], 'singular': ['4.3.2.p8'], 'slepc': ['3.21'], 'slepc4py': ['3.21'], 'snappy': ['1.2'], 'soapysdr': ['0.8'], 'sox': ['14.4.2'], 'spdlog': ['1.12'], 'sqlite': ['3'], 'srm_ifce': ['1.24.6'], 'starlink_ast': ['9.2.7'], 'suitesparse': ['5'], 'superlu_dist': ['8'], 'svt_av1': ['2.1.0'], 'target_goarch': ['arm64'], 'target_gobin': ['${PREFIX}/bin/'], 'target_goos': ['darwin'], 'tbb': ['2021'], 'tbb_devel': ['2021'], 'tensorflow': ['2.15'], 'thrift_cpp': ['0.18.1'], 'tiledb': ['2.23'], 'tinyxml2': ['10'], 'tk': ['8.6'], 'ucx': ['1.16.0'], 'uhd': ['4.6.0'], 'urdfdom': ['4.0'], 'vlfeat': ['0.9.21'], 'volk': ['3.1'], 'vtk': ['9.2.6'], 'wcslib': ['8'], 'wxwidgets': ['3.2'], 'x264': ['1!164.*'], 'x265': ['3.5'], 'xerces_c': ['3.2'], 'xrootd': ['5'], 'xz': ['5'], 'zeromq': ['4.3.5'], 'zfp': ['1.0'], 'zip_keys': [['arrow_cpp', 'libarrow', 'libarrow_all'], ['c_compiler_version', 'cxx_compiler_version', 'fortran_compiler_version'], ['python', 'numpy', 'python_impl']], 'zlib': ['1.2'], 'zlib_ng': ['2.0'], 'zstd': ['1.5']}Erroring code was introduced in #3344 |
corneliusroemer
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to corneliusroemer/conda-build
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Jul 18, 2024
…oesn't resolves conda#5416 resolves conda#3404 (closed because stale, not because fixed) Bug was possibly introduced in conda#3344
3 tasks
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I'll throw my oar in on this one too! For me (given the age of this) I don't see it with conda-build 24.9.0 but do see it with 24.11.0. |
This was referenced Nov 26, 2024
3 tasks
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I'm joining the crowd waiting for the fix. I just got the same error for mlflow 2.18.0 only on win-64 |
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I also see this on Linux and macOS if I force the feedstock to install conda-build 24.11 (default is 24.9 which doesn't error), see conda-forge/lalsimulation-feedstock#70. |
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I also got the same error when I updated the build number, but for linux: |
suzannejin
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to conda-forge/r-propr-feedstock
that referenced
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Nov 26, 2024
Bug is detected for conda-build v24.11 conda/conda-build#5416. This bug prevents the correct building of the packages. This is a temporal fix to create the conda container without using the v24.11
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Ah we've fixed variable finding and this is exposing other bugs. Fun. A bug fix release should happen in the next day or so, I hope. |
wshanks
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Nov 26, 2024
wshanks
added a commit
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Nov 26, 2024
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In the mean time, the suggestion in conda-forge/gdstk-feedstock#63 (comment) to add the following to Just need to remember to take that out after this is fixed... (Just noting here because I see some linked feedstock PRs where the workaround of dropping Windows builds is being used). |
lalsuite-github-bot
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to lscsoft/lalsuite
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Nov 27, 2024
works around conda/conda-build#5416 closes #769
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Checklist
What happened?
While testing a tarball (this one):
Putting a breakpoint just before the line throwing the error shows:
The tarball under test was built using the recipe/commit here.
Conda Info
No response
Conda Config
No response
Conda list
No response
Additional Context
Seems to duplicate #3404, but that's closed.
The text was updated successfully, but these errors were encountered: