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60 Open 17 Closed
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Issues list

khmer-protocols/mrnaseq/3-big-assembly.txt trinity installation
#163 opened Mar 3, 2017 by taylorreiter
2
[Acceptance] Installing khmer fails, setuptools doesn't exist, need to backport fix from Master
#161 opened Mar 9, 2015 by SensibleSalmon
@SensibleSalmon
1
Bring mrnaseq instructions up to date (under mrnaseq/)
#151 opened Feb 26, 2015 by ctb
8 tasks
3
Switch layout of kp site over to simpler single-pane layout?
#150 opened Feb 26, 2015 by ctb
Bring amazon instructions up to date
#149 opened Feb 26, 2015 by ctb
4 tasks
Missing directory while installing samtools (eelpond)
#137 opened Nov 14, 2014 by GraceGanzel
AWS docs specify m1.large/chapter 2 specifies m1.xlarge
#135 opened Oct 28, 2014 by GraceGanzel
Normalize by median pct
#133 opened Sep 24, 2014 by tshori
2
Warning during normalize-by-median
#131 opened Aug 11, 2014 by danbacastro
5
acceptance test failure in eel-pond/plot-expression.py
#129 opened Aug 5, 2014 by mr-c
5
Try out CONCOCT on metagenomes
#126 opened Jul 15, 2014 by ctb
Add taxator-tk taxonomy to metagenome protocol
#125 opened Jul 15, 2014 by ctb
Assemblies crash because of memory issues.
#124 opened Jul 14, 2014 by SherineAwad
Develop checklist for protocols release
#122 opened Jul 6, 2014 by ctb
4 tasks
Develop checklist for protocols code review
#118 opened Jul 6, 2014 by ctb
8
Remove Run.txt and Readme.txt
#109 opened Jun 8, 2014 by ctb
@SherineAwad
1
a link to khmer-protocols on khmer doc?
#97 opened May 16, 2014 by qingpeng
testasm?
#94 opened May 3, 2014 by SherineAwad
@ctb
-Q 33 may not be necessary in metagenomics quality trimming
#86 opened Apr 22, 2014 by qingpeng
@qingpeng
"Getting started with Amazon EC2" page lacks discussion about volume
#79 opened Apr 14, 2014 by qingpeng
Can we automatically figure out what adapters were used?
#76 opened Mar 29, 2014 by ctb
Add directions on tempdir for formatdb Wait
#75 opened Mar 16, 2014 by LSheneman
Document use of AWS snapshots V 0.8.5
#73 opened Mar 5, 2014 by LSheneman
1
Update AWS screenshoots V 0.8.5
#72 opened Mar 5, 2014 by LSheneman
Fix metadata so latest eel-pond shows up on google Wait
#71 opened Mar 5, 2014 by LSheneman
2
ProTip! Follow long discussions with comments:>50.