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Feature #2168 tc_diag#2555

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JohnHalleyGotway merged 107 commits intodevelopdtcenter/MET:developfrom feature_2168_tc_diagdtcenter/MET:feature_2168_tc_diagCopy head branch name to clipboardJun 9, 2023

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Commits on Sep 26, 2022

• Per #2168, inital hooks for adding tc_diag.

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• Per #2168, run bootstrap on seneca to update Makefile.in files.

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• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Per #2168, making it compile.

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Commits on Sep 27, 2022

• Per #2168, fix a pretty obvious bug. The tc_pairs tool should identify itself as tc_pairs rather than tc_gen!

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• Per #2186, add new tc_pairs_CONSENSUS test to unit_tc_pairs.xml to demonstrate the computation of consensus tracks. Note however that the TC-Pairs computed consensus do not match the output from NH…

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• Per #2168, add empty unit_tc_diag.xml file to house new tests.

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• Per #2168, add new User's Guide chapter for the tc-diag tool.

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• Per #2168, add TCDiagConfig file, but the contents are still for TC-RMW.

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• Per #2168, more bulk changes to switch from tc_rmw to tc_diag.

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Commits on Sep 30, 2022

• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• per #2168, work in progress. It compiles but doesn't actually do what we want it to do yet.

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Commits on Dec 12, 2022

• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Per #2168, update configure with changes from the develop branch.

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Commits on Dec 13, 2022

• Per #2168, get tc_diag compiling again.

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Commits on Dec 15, 2022

• Per #2168, minor change adding convert(x) to the default TC-Diag config file. It was actually quietly supported. Just adding it for clarity.

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Commits on Dec 21, 2022

• Per #2168, work in progress.

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• Per #2138, only compile tc_diag when --enable-python is set.

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• Per #2138, only compile tc_diag when --enable-python is set.

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• Per #2168, update TC-Diag config options, apply consistent whitespace formatting, and get the tool compiling again.

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• Per #2168, update TC-Diag config file contents.

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• Per #2168, add unit_tc_diag.xml to the list of tests to be run. This test runs but does NOT actually do much work. Had to use dynamically allocated arrays instead of a vector to avoid memory issues.

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• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Per #2168, only list NetCDF output file when it's actually being written.

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Commits on Dec 23, 2022

• Per #2168, so this is compiling right now but not actually running again yet. I'm still working on supporting multiple range/azimuth grids being used.

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• Per #2168, still compiling, more tweaks.

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Commits on Mar 1, 2023

• Merge branch 'develop' into feature_2168_tc_diag

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Commits on Mar 2, 2023

• Merge branch 'develop' into feature_2168_tc_diag

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• Per #2168, update tc_diag Makefile.in to use seneca's version of autoconf.

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Commits on Mar 6, 2023

• Per #2168, let model be set to an array of strings rather than a single value. Update tc_diag.cc to error out if more than one track initialization time is provded.

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Commits on Mar 29, 2023

• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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Commits on Mar 31, 2023

• Per #2168, certainly not done but tc_diag is actually compiling right now. Just saving the state.

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• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Per #2168, got it compiling again after simplifying the config file to use the domain_info dictionary.

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Commits on Apr 3, 2023

• Per #2168, compiling but still a work in progress

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Commits on Apr 4, 2023

• Per #2168, get the config file parsing logic working.

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Commits on Apr 7, 2023

• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Per #2168, compiling again.

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Commits on Apr 11, 2023

• Per #2168 work in progress

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• Per #2168, tweak log message.

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Commits on Apr 13, 2023

• Per #2168, add TimeArray::add_const() to easily setup time arrays.

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• Per #2168, add VarInfoFactory::new_copy() function

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• Per #2168, add VarInfo::time_str() function

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• Per #2168, no real change. Just spacing

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• Per #2168 redefined VarInfo::magic_time_str()

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• Per #2168, update vx_series_data get_series_entry() functionality to search ALL of the input data files rather than just one.

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Commits on Apr 14, 2023

• Per #2168 work in progress

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Commits on Apr 18, 2023

• Per #2168, saving state before trying to get parallelization logic working.

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Commits on Apr 25, 2023

• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Per #2168, add a vortex_removal flag to the TC-Diag config file and parse it. The vortex removal logic does NOT exist here yet but should be added to do the removal when the ADECK Tech ID does not …

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• Per #2168, add DataOptInfo struct to store the -data gridded data files along with the list of one or more corresponding ATCF Tech ID's.

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Commits on Apr 26, 2023

• Per #2523, change the order of the NetCDF diensions written by the tc_rmw tool. The dimensions should have time first, vertical level second (if applicable), and then gridded dimensions (i.e. lat,l…

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• Per #2523, fix the order of the dimensions listed in the documentation.

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Commits on Apr 27, 2023

• Per #2523, fix RMW-Analysis to handle the new order of dimensions.

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• Merge remote-tracking branch 'origin/feature_2523_dim_order' into feature_2168_tc_diag

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Commits on May 9, 2023

• Per #2168, do NOT subtract by 1 when computing the number of ranges and azimuths.

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• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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Commits on May 15, 2023

• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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• Per #2168, generalize def_tc_range_azimuth() to write explicity ranges in km rather than as a function of RMW.

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• Per #2168, work in progress. Update the library code to write range units in km rather than always rmw.

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• Per #2168, refining variables and levels for TC-Diag.

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• Per #2168, work in progress. Still lots to do.

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Commits on May 16, 2023

• Per #2168, work in progress

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Commits on May 17, 2023

• Per #2168, update the list of pressure levels

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• Per #2168, add P100 to the list of default TC-Diag pressure levels

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Commits on May 18, 2023

• Per #2168, udpate vx_tc_util library with tc_diag changes

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• Per #2168, still a work in progress but I am getting good NetCDF output files containing 3d vars. The parallelization is still not working.

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Commits on May 19, 2023

• Per #2168, add the init and lead times to the NetCDF output from TC-RMW and TC-Diag. Also rename 'atcf_' varialbes as 'Point' instead.

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• Per #2168, add the init and lead times to the NetCDF output from TC-RMW.

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• Per #2168, switch how the TC values are written to support to minutes and seconds instead of only hours

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• per #2168, fix lead_time_ut to lead_time_sec

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• Per #2168, udpate tc-diag to write timestamps in as both human-readable strings and as unixtime strings.

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• Per #2168, make tc_rmw and tc_diag write time information in a consistent way.

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Commits on May 25, 2023

• Merge remote-tracking branch 'origin/develop' into feature_2168_tc_diag

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Commits on May 26, 2023

• Per #2168, create scripts/python/tc_diag directory to house diagnostics python code.

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• Per #2168, by default, define the diagnostics scripts once at a higher level of config file context

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Commits on May 30, 2023

• Per #2168, working on python embedding part.

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• Per #2168, working on user python path

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• Per #2168, updating Makefile.in on seneca.

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Commits on May 31, 2023

• Per #2168, only support numeric diagnostics.

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Commits on Jun 1, 2023

• Per #2168, split write_tc_track() utility function out into write_tc_track_lines() and write_tc_track_lat_lon().

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• Per #2168, enhance copy_nc_var_data() to copy over strings as well.

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• Per #2168, work in progress for TC-Diag. Have the combined cyclindrical coordinates NetCDF output and NetCDF diagnostics output in good shape. Need to write the ascii diagnostics output.

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• Per #2168, actually remove the temprorary NetCDF files written for each track point.

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• Per #2168, remove unused and uneeded config TC-Diag config file options.

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• Per #2168, tweak log message.

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• Per #2168, tweak log message.

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• Per #2168, tweak log message.

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Commits on Jun 2, 2023

• Per #2168, this is not the real solution but just a placeholder for the logic of the TC diagnostics computation scripts.

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• Per #2168, update the default diag python script to list bad data values for all the known CIRA diagnostics.

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• Per #2168, define a beta version library function to warn users about new/incomplete features.

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• Per #2168, change the default tc-diag config file and code to only request the NetCDF range/azimuth output files since that's all that's supported in this version.

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• Per #2168, update TC-Diag to write global attributes to NetCDF output files and replace JHG comments with TODO to list out future development tasks.

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• Per #2168, comment out remaining omp line to prevent runtime errors

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• Per #2168, update config file version numbers to 11.1.0.

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• Per #2168, work in progress trying to get the tc_diag unit test to work.

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• Per #2168, list expected output file name for the tc_diag unit test

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Commits on Jun 6, 2023

• Per #2168, update unit test based on gfs file locations.

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• Per #2168, naming the tc-diag chapter with the correct extension.

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• Per #2168, fix tc-diag doc formatting to get rid of warnings.

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Commits on Jun 7, 2023

• Per #2168, revert back how the track lines are written so that the rmw_analysis tool keeps working without any changes needed.

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• Make tc_diag output directory before writing a file list to it

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• Pushing small change to tc_diag xml to trigger GHA rerun for this PR.

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• Per #2168, update copyright year.

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Commits on Jun 9, 2023

• Per #2168, fixing a few small details based on Jonathan's PR review.

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