[Elastic Agent] Adjust installation path in container

x-pack/elastic-agent/CHANGELOG.next.asciidoc

@@ -78,6 +78,9 @@
 - Fix apm-server supported outputs not being in sync with supported output types. {pull}26885[26885]
 - Set permissions during installation {pull}26665[26665]
 - Disable monitoring during fleet-server bootstrapping. {pull}27222[27222]
+- Fix issue with atomic extract running in K8s {pull}27396[27396]
+- Fix issue with install directory in state path in K8s {pull}27396[27396]
+- Disable monitoring during fleet-server bootstrapping. {pull}27222[27222]
 
 ==== New features
 

x-pack/elastic-agent/pkg/agent/application/paths/common.go

@@ -28,6 +28,8 @@ var (
 	configPath      string
 	configFilePath  string
 	logsPath        string
+	downloadsPath   string
+	installPath     string
 	unversionedHome bool
 	tmpCreator      sync.Once
 )
@@ -44,6 +46,8 @@ func init() {
 	fs.StringVar(&configPath, "path.config", configPath, "Config path is the directory Agent looks for its config file")
 	fs.StringVar(&configFilePath, "c", DefaultConfigName, "Configuration file, relative to path.config")
 	fs.StringVar(&logsPath, "path.logs", logsPath, "Logs path contains Agent log output")
+	fs.StringVar(&downloadsPath, "path.downloads", downloadsPath, "Downloads path contains binaries Agent downloads")
+	fs.StringVar(&installPath, "path.install", installPath, "Install path contains binaries Agent extracts")
 }
 
 // Top returns the top directory for Elastic Agent, all the versioned
@@ -139,6 +143,32 @@ func VersionedHome(base string) string {
 	return filepath.Join(base, "data", fmt.Sprintf("elastic-agent-%s", release.ShortCommit()))
 }
 
+// Downloads returns the downloads directory for Agent
+func Downloads() string {
+	if downloadsPath == "" {
+		return filepath.Join(Home(), "downloads")
+	}
+	return downloadsPath
+}
+
+// SetDownloads updates the path for the downloads.
+func SetDownloads(path string) {
+	downloadsPath = path
+}
+
+// Install returns the install directory for Agent
+func Install() string {
+	if installPath == "" {
+		return filepath.Join(Home(), "install")
+	}
+	return installPath
+}
+
+// SetInstall updates the path for the install.
+func SetInstall(path string) {
+	installPath = path
+}
+
 // initialTop returns the initial top-level path for the binary
 //
 // When nested in top-level/data/elastic-agent-${hash}/ the result is top-level/.

x-pack/elastic-agent/pkg/agent/cmd/common.go

@@ -44,6 +44,8 @@ func NewCommandWithArgs(args []string, streams *cli.IOStreams) *cobra.Command {
 	cmd.PersistentFlags().AddGoFlag(flag.CommandLine.Lookup("path.config"))
 	cmd.PersistentFlags().AddGoFlag(flag.CommandLine.Lookup("c"))
 	cmd.PersistentFlags().AddGoFlag(flag.CommandLine.Lookup("path.logs"))
+	cmd.PersistentFlags().AddGoFlag(flag.CommandLine.Lookup("path.downloads"))
+	cmd.PersistentFlags().AddGoFlag(flag.CommandLine.Lookup("path.install"))
 
 	// logging flags
 	cmd.PersistentFlags().AddGoFlag(flag.CommandLine.Lookup("v"))

x-pack/elastic-agent/pkg/agent/cmd/container.go

@@ -334,6 +334,12 @@ func buildEnrollArgs(cfg setupConfig, token string, policyID string) ([]string,
 		"--path.config", paths.Config(),
 		"--path.logs", paths.Logs(),
 	}
+	if paths.Downloads() != "" {
+		args = append(args, "--path.downloads", paths.Downloads())
+	}
+	if paths.Install() != "" {
+		args = append(args, "--path.install", paths.Install())
+	}
 	if !paths.IsVersionHome() {
 		args = append(args, "--path.home.unversioned")
 	}
@@ -704,16 +710,18 @@ func setPaths(statePath, configPath, logsPath string, writePaths bool) error {
 		}
 	}
 	// sync the downloads to the data directory
-	srcDownloads := filepath.Join(paths.Home(), "downloads")
 	destDownloads := filepath.Join(statePath, "data", "downloads")
-	if err := syncDir(srcDownloads, destDownloads); err != nil {
+	if err := syncDir(paths.Downloads(), destDownloads); err != nil {
 		return fmt.Errorf("syncing download directory to STATE_PATH(%s) failed: %s", statePath, err)
 	}
+	originalInstall := paths.Install()
 	originalTop := paths.Top()
 	paths.SetTop(topPath)
 	paths.SetConfig(configPath)
 	// when custom top path is provided the home directory is not versioned
 	paths.SetVersionHome(false)
+	// install path stays on container default mount (otherwise a bind mounted directory could have noexec set)
+	paths.SetInstall(originalInstall)
 	// set LOGS_PATH is given
 	logsPath = envWithDefault(logsPath, "LOGS_PATH")
 	if logsPath != "" {

x-pack/elastic-agent/pkg/agent/cmd/enroll_cmd.go

@@ -546,6 +546,12 @@ func (c *enrollCmd) startAgent(ctx context.Context) (<-chan *os.ProcessState, er
 		"--path.home", paths.Top(), "--path.config", paths.Config(),
 		"--path.logs", paths.Logs(),
 	}
+	if paths.Downloads() != "" {
+		args = append(args, "--path.downloads", paths.Downloads())
+	}
+	if paths.Install() != "" {
+		args = append(args, "--path.install", paths.Install())
+	}
 	if !paths.IsVersionHome() {
 		args = append(args, "--path.home.unversioned")
 	}

x-pack/elastic-agent/pkg/artifact/config.go

@@ -5,7 +5,6 @@
 package artifact
 
 import (
-	"path/filepath"
 	"runtime"
 	"strings"
 	"time"
@@ -43,16 +42,15 @@ type Config struct {
 
 // DefaultConfig creates a config with pre-set default values.
 func DefaultConfig() *Config {
-	homePath := paths.Home()
 	transport := httpcommon.DefaultHTTPTransportSettings()
 
 	// binaries are a getting bit larger it might take >30s to download them
 	transport.Timeout = 120 * time.Second
 
 	return &Config{
 		SourceURI:             "https://artifacts.elastic.co/downloads/",
-		TargetDirectory:       filepath.Join(homePath, "downloads"),
-		InstallPath:           filepath.Join(homePath, "install"),
+		TargetDirectory:       paths.Downloads(),
+		InstallPath:           paths.Install(),
 		HTTPTransportSettings: transport,
 	}
 }

x-pack/elastic-agent/pkg/artifact/download/fs/downloader.go

@@ -116,13 +116,13 @@ func (e *Downloader) downloadFile(filename, fullPath string) (string, error) {
 func getDropPath(cfg *artifact.Config) string {
 	// if drop path is not provided fallback to beats subfolder
 	if cfg == nil || cfg.DropPath == "" {
-		return filepath.Join(paths.Home(), "downloads")
+		return paths.Downloads()
 	}
 
 	// if droppath does not exist fallback to beats subfolder
 	stat, err := os.Stat(cfg.DropPath)
 	if err != nil || !stat.IsDir() {
-		return filepath.Join(paths.Home(), "downloads")
+		return paths.Downloads()
 	}
 
 	return cfg.DropPath

x-pack/elastic-agent/pkg/artifact/install/atomic/atomic_installer.go

@@ -13,7 +13,6 @@ import (
 
 	"github.com/hashicorp/go-multierror"
 
-	"github.com/elastic/beats/v7/x-pack/elastic-agent/pkg/agent/application/paths"
 	"github.com/elastic/beats/v7/x-pack/elastic-agent/pkg/agent/program"
 )
 
@@ -37,10 +36,19 @@ func NewInstaller(i embeddedInstaller) (*Installer, error) {
 // Install performs installation of program in a specific version.
 func (i *Installer) Install(ctx context.Context, spec program.Spec, version, installDir string) error {
 	// tar installer uses Dir of installDir to determine location of unpack
-	tempDir, err := ioutil.TempDir(paths.TempDir(), "elastic-agent-install")
+	//
+	// installer is ran inside a tmp directory created in the parent installDir, this is so the atomic
+	// rename always occurs on the same mount path that holds the installation directory
+	tempDir, err := ioutil.TempDir(filepath.Dir(installDir), "tmp")
 	if err != nil {
 		return err
 	}
+
+	// always remove the entire tempDir
+	defer func() {
+		os.RemoveAll(tempDir)
+	}()
+
 	tempInstallDir := filepath.Join(tempDir, filepath.Base(installDir))
 
 	// cleanup install directory before Install