Added minor fixes for ontoconvert #739
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This fails because source annotation does not exist in the ontology and therfore copy_annotation cannot find it. If it does not exist in the ontology, it obviously is not used and it therefore does not make sense to proceed with copying these annotations. |
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## master #739 +/- ##
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- Coverage 72.14% 72.11% -0.03%
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Files 17 17
Lines 3486 3486
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- Hits 2515 2514 -1
- Misses 971 972 +1 ☔ View full report in Codecov by Sentry. |
francescalb
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May 2, 2024
francescalb
added a commit
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May 8, 2024
# Description Minor fixes for ontoconvert option help. Also included `emmo:comment` to the set of annotations included in the `--copy-emmo-annotations` option. **Note**: Builds on top of PR #756. Merge that PR first! ## Type of change - [x] Bug fix. - [ ] New feature. - [ ] Documentation update. - [ ] Test update. ## Checklist <!-- Put an `x` in the boxes that apply. You can also fill these out after creating the PR. --> This checklist can be used as a help for the reviewer. - [ ] Is the code easy to read and understand? - [ ] Are comments for humans to read, not computers to disregard? - [ ] Does a new feature has an accompanying new test (in the CI or unit testing schemes)? - [ ] Has the documentation been updated as necessary? - [ ] Does this close the issue? - [ ] Is the change limited to the issue? - [ ] Are errors handled for all outcomes? - [ ] Does the new feature provide new restrictions on dependencies, and if so is this documented? ## Comments <!-- Additional comments here, including clarifications on checklist if applicable. --> --------- Co-authored-by: Francesca L. Bleken <48128015+francescalb@users.noreply.github.com>
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Description
Minor fixes for ontoconvert option help.
Also included
emmo:commentto the set of annotations included in the--copy-emmo-annotationsoption.Note: Builds on top of PR #756. Merge that PR first!
Type of change
Checklist
This checklist can be used as a help for the reviewer.
Comments