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#2303 - Import of variant monomers from Sequence doesn't work for RN…
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…A and FASTA for RNA/DNA

Fix code. Update UT
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AliaksandrDziarkach committed Sep 16, 2024
1 parent 3f841ab commit 60af756
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Showing 6 changed files with 330 additions and 237 deletions.
2 changes: 1 addition & 1 deletion api/tests/integration/tests/formats/ket_to_helm.py
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Expand Up @@ -46,7 +46,7 @@ def find_diff(a, b):
"helm_mixed_custom": "RNA1{[dR](A:10+[Xan]:20+G:30+T:50)P.[dR](A:10+C:20+G:30+T:50)P.[dR](A+C+G+T)}$$$$V2.0",
"helm_aminoacids_variants": "PEPTIDE1{([Dha]+N).(L+I).(E+Q).(A+C+D+E+F+G+H+I+K+L+M+N+O+P+Q+R+S+T+U+V+W+Y)}$$$$V2.0",
"dna_variants": "RNA1{[dR](C+G+T)P.[dR](A+C+G+T)}$$$$V2.0",
"rna_variants": "RNA1{R(G+T)P.R(A+C+G+T)}$$$$V2.0",
"rna_variants": "RNA1{R(A+G)P.R(G+T)P.R(A+C+G+T)}$$$$V2.0",
"helm_monomer_molecule": "PEPTIDE1{A}|PEPTIDE2{G}|CHEM1{[C(N[*:2])=C[*:1] |$;;_R2;;_R1$|]}$CHEM1,PEPTIDE1,1:R2-1:R1$$$V2.0",
}

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@@ -1,2 +1,2 @@
>Sequence1
KN
RKN
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