Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Change symbols of monomers #5324

Closed
7 tasks done
ljubica-milovic opened this issue Aug 20, 2024 · 1 comment · Fixed by #5619
Closed
7 tasks done

Change symbols of monomers #5324

ljubica-milovic opened this issue Aug 20, 2024 · 1 comment · Fixed by #5619
Assignees
@ljubica-milovic
Labels
feature request Monomer Library
Milestone
Ketcher 2.26.0-rc.1

Comments

@ljubica-milovic
Copy link
Collaborator

ljubica-milovic commented Aug 20, 2024 •
edited
Loading

Peptides

  • L-threoninol
  • D-threoninol
Old symbol New symbol Name
dThrol Thr-ol L-threoninol
Thr-ol dThrol D-threoninol

Nucleotides

  • 2,6-Diaminopurine
  • Hydroxymethyl dC
  • 5-Bromo-deoxyridine
Old symbol New symbol Name
2-Amino-dA 2-damdA 2,6-Diaminopurine
5HydMe-dC 5hMedC Hydroxymethyl dC
5-Bromo dU 5Br-dU 5-Bromo-deoxyridine

Phosphates

  • Dihydrogen phosphate
  • Dihydrogen phosphorothioate
Old symbol New symbol Name
naP P- Dihydrogen phosphate (old name: Sodium Phosphate)
nasP sP- Dihydrogen phosphorothioate (old name: Sodium Phosphothiotate)
@ljubica-milovic ljubica-milovic self-assigned this Aug 20, 2024
rrodionov91 added a commit that referenced this issue Oct 1, 2024
@rrodionov91
#5325 - Change natural analogue of monomers
02ab839 
#5324 - Change symbols of monomers

#5323 - Change names of monomers

#5195 - Some content problems in monomer library

#5111 - Change structure of monomers
@rrodionov91 rrodionov91 mentioned this issue Oct 1, 2024
Merged
9 tasks
@rrodionov91 rrodionov91 linked a pull request Oct 1, 2024 that will close this issue
#5325 - Change natural analogue of monomers #5619
Merged
9 tasks
rrodionov91 added a commit that referenced this issue Oct 3, 2024
@rrodionov91 @AlexeyGirin
#5325 - Change natural analogue of monomers (#5619)
8454ce7 
#5325 - Change natural analogue of monomers
#5324 - Change symbols of monomers
#5323 - Change names of monomers
#5195 - Some content problems in monomer library
#5111 - Change structure of monomers

---------

Co-authored-by: Alexey Girin <agirin@mail.ru>
@AlexeyGirin
Copy link
Collaborator

Verified.

Versions

  • Ketcher Version 2.26.0-rc.1 Build at 2024-10-04; 18:45:04
  • Indigo Toolkit Version 1.25.0-rc.1.0-g704673fcb-wasm32-wasm-clang-19.0.0
  • Chrome Version 129.0.6668.90 (Official Build) (64-bit)
  • Win10

@AlexeyGirin AlexeyGirin mentioned this issue Oct 7, 2024
Open
Guch1g0v pushed a commit that referenced this issue Oct 17, 2024
@rrodionov91 @AlexeyGirin @Guch1g0v
#5325 - Change natural analogue of monomers (#5619)
907ad01 
#5325 - Change natural analogue of monomers
#5324 - Change symbols of monomers
#5323 - Change names of monomers
#5195 - Some content problems in monomer library
#5111 - Change structure of monomers

---------

Co-authored-by: Alexey Girin <agirin@mail.ru>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@ljubica-milovic ljubica-milovic

Labels
feature request Monomer Library
Projects
None yet
Milestone
Ketcher 2.26.0-rc.1
Development

Successfully merging a pull request may close this issue.

#5325 - Change natural analogue of monomers epam/ketcher
2 participants
@AlexeyGirin @ljubica-milovic