Extend Ketcher API with a function to update monomers library

[svvald]

A new function updateMonomersLibrary has to be added to a Ketcher API. This function should accept monomers description in ket format in JSON notation.
Once this function is invoked, new monomers have to be added to the monomers library in the macromolecules mode.
If some of the provided monomers overlap with the existing ones with their type and name, new monomers have to replace the existing ones

Also additional parameter has to be provided for Editor props for customers to be able to provide additional library data on Ketcher initialization

[Zhirnoff]

Tested. Used command

ketcher.updateMonomersLibrary(`{
  "root": {
    "nodes": [],
    "connections": [],
    "templates": [
      {
        "$ref": "monomerTemplate-Test___TestMonomerForUpdate1"
      },
      {
        "$ref": "monomerTemplate-Test___TestMonomerForUpdate2"
      },
      {
        "$ref": "monomerTemplate-Test___TestMonomerForUpdate3"
      }
    ]
  },
  "monomerTemplate-Test___TestMonomerForUpdate1": {
    "type": "monomerTemplate",
    "atoms": [
      {
        "label": "O",
        "location": [
          -0.8526,
          1.541,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          -0.3405,
          0.131,
          0
        ],
        "stereoLabel": "abs"
      },
      {
        "label": "C",
        "location": [
          0.3301,
          2.4636,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          1.1586,
          0.1823,
          0
        ],
        "stereoLabel": "abs"
      },
      {
        "label": "C",
        "location": [
          1.5731,
          1.6239,
          0
        ]
      },
      {
        "label": "O",
        "location": [
          2.0777,
          -1.0008,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          -1.1818,
          -1.1087,
          0
        ]
      },
      {
        "label": "O",
        "location": [
          -2.6787,
          -1.0008,
          0
        ]
      },
      {
        "label": "H",
        "location": [
          -3.3525,
          -1.9937,
          0
        ]
      },
      {
        "label": "H",
        "location": [
          3.2666,
          -0.8378,
          0
        ]
      }
    ],
    "bonds": [
      {
        "type": 1,
        "atoms": [
          0,
          1
        ]
      },
      {
        "type": 1,
        "atoms": [
          0,
          2
        ]
      },
      {
        "type": 1,
        "atoms": [
          1,
          3
        ]
      },
      {
        "type": 1,
        "atoms": [
          1,
          6
        ],
        "stereo": 1
      },
      {
        "type": 1,
        "atoms": [
          2,
          4
        ]
      },
      {
        "type": 1,
        "atoms": [
          3,
          4
        ]
      },
      {
        "type": 1,
        "atoms": [
          3,
          5
        ],
        "stereo": 6
      },
      {
        "type": 1,
        "atoms": [
          5,
          9
        ]
      },
      {
        "type": 1,
        "atoms": [
          6,
          7
        ]
      },
      {
        "type": 1,
        "atoms": [
          7,
          8
        ]
      }
    ],
    "class": "AminoAcid",
    "classHELM": "PEPTIDE",
    "id": "Test___TestMonomerForUpdate1",
    "fullName": "TestMonomerForUpdate1",
    "alias": "Test1",
    "attachmentPoints": [
      {
        "attachmentAtom": 7,
        "leavingGroup": {
          "atoms": [
            8
          ]
        },
        "type": "left"
      },
      {
        "attachmentAtom": 5,
        "leavingGroup": {
          "atoms": [
            9
          ]
        },
        "type": "right"
      }
    ],
    "naturalAnalogShort": "A"
  },
  "monomerTemplate-Test___TestMonomerForUpdate2": {
    "type": "monomerTemplate",
    "atoms": [
      {
        "label": "O",
        "location": [
          -0.8526,
          1.541,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          -0.3405,
          0.131,
          0
        ],
        "stereoLabel": "abs"
      },
      {
        "label": "C",
        "location": [
          0.3301,
          2.4636,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          1.1586,
          0.1823,
          0
        ],
        "stereoLabel": "abs"
      },
      {
        "label": "C",
        "location": [
          1.5731,
          1.6239,
          0
        ]
      },
      {
        "label": "O",
        "location": [
          2.0777,
          -1.0008,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          -1.1818,
          -1.1087,
          0
        ]
      },
      {
        "label": "O",
        "location": [
          -2.6787,
          -1.0008,
          0
        ]
      },
      {
        "label": "H",
        "location": [
          -3.3525,
          -1.9937,
          0
        ]
      },
      {
        "label": "H",
        "location": [
          3.2666,
          -0.8378,
          0
        ]
      }
    ],
    "bonds": [
      {
        "type": 1,
        "atoms": [
          0,
          1
        ]
      },
      {
        "type": 1,
        "atoms": [
          0,
          2
        ]
      },
      {
        "type": 1,
        "atoms": [
          1,
          3
        ]
      },
      {
        "type": 1,
        "atoms": [
          1,
          6
        ],
        "stereo": 1
      },
      {
        "type": 1,
        "atoms": [
          2,
          4
        ]
      },
      {
        "type": 1,
        "atoms": [
          3,
          4
        ]
      },
      {
        "type": 1,
        "atoms": [
          3,
          5
        ],
        "stereo": 6
      },
      {
        "type": 1,
        "atoms": [
          5,
          9
        ]
      },
      {
        "type": 1,
        "atoms": [
          6,
          7
        ]
      },
      {
        "type": 1,
        "atoms": [
          7,
          8
        ]
      }
    ],
    "class": "Base",
    "classHELM": "RNA",
    "id": "Test___TestMonomerForUpdate2",
    "fullName": "TestMonomerForUpdate2",
    "alias": "Test",
    "attachmentPoints": [
      {
        "attachmentAtom": 7,
        "leavingGroup": {
          "atoms": [
            8
          ]
        },
        "type": "left"
      },
      {
        "attachmentAtom": 5,
        "leavingGroup": {
          "atoms": [
            9
          ]
        },
        "type": "right"
      }
    ],
    "naturalAnalogShort": "A"
  },
  "monomerTemplate-Test___TestMonomerForUpdate3": {
    "type": "monomerTemplate",
    "atoms": [
      {
        "label": "O",
        "location": [
          -0.8526,
          1.541,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          -0.3405,
          0.131,
          0
        ],
        "stereoLabel": "abs"
      },
      {
        "label": "C",
        "location": [
          0.3301,
          2.4636,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          1.1586,
          0.1823,
          0
        ],
        "stereoLabel": "abs"
      },
      {
        "label": "C",
        "location": [
          1.5731,
          1.6239,
          0
        ]
      },
      {
        "label": "O",
        "location": [
          2.0777,
          -1.0008,
          0
        ]
      },
      {
        "label": "C",
        "location": [
          -1.1818,
          -1.1087,
          0
        ]
      },
      {
        "label": "O",
        "location": [
          -2.6787,
          -1.0008,
          0
        ]
      },
      {
        "label": "H",
        "location": [
          -3.3525,
          -1.9937,
          0
        ]
      },
      {
        "label": "H",
        "location": [
          3.2666,
          -0.8378,
          0
        ]
      }
    ],
    "bonds": [
      {
        "type": 1,
        "atoms": [
          0,
          1
        ]
      },
      {
        "type": 1,
        "atoms": [
          0,
          2
        ]
      },
      {
        "type": 1,
        "atoms": [
          1,
          3
        ]
      },
      {
        "type": 1,
        "atoms": [
          1,
          6
        ],
        "stereo": 1
      },
      {
        "type": 1,
        "atoms": [
          2,
          4
        ]
      },
      {
        "type": 1,
        "atoms": [
          3,
          4
        ]
      },
      {
        "type": 1,
        "atoms": [
          3,
          5
        ],
        "stereo": 6
      },
      {
        "type": 1,
        "atoms": [
          5,
          9
        ]
      },
      {
        "type": 1,
        "atoms": [
          6,
          7
        ]
      },
      {
        "type": 1,
        "atoms": [
          7,
          8
        ]
      }
    ],
    "class": "CHEM",
    "classHELM": "CHEM",
    "id": "Test___TestMonomerForUpdate3",
    "fullName": "TestMonomerForUpdate3",
    "alias": "Test",
    "attachmentPoints": [
      {
        "attachmentAtom": 7,
        "leavingGroup": {
          "atoms": [
            8
          ]
        },
        "type": "left"
      },
      {
        "attachmentAtom": 5,
        "leavingGroup": {
          "atoms": [
            9
          ]
        },
        "type": "right"
      }
    ],
    "naturalAnalogShort": "A"
  }
}`)

Desktop:

• OS: Windows 11
• Browser Chrome
• Version 128.0.6613.120 (Official Build) (64-bit)

Ketcher version
[Version 2.28.0-rc.1]
Indigo version
[Version 1.27.0-rc.1]