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[auto] Update dependencies in poetry.lock #839

Merged
merged 1 commit into from
Sep 17, 2024
Merged

[auto] Update dependencies in poetry.lock #839

merged 1 commit into from
Sep 17, 2024

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tcompa
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@tcompa tcompa commented Sep 17, 2024

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 3 updates, 0 removals

  - Updating zipp (3.20.1 -> 3.20.2)
  - Updating importlib-metadata (8.4.0 -> 8.5.0)
  - Updating pytz (2024.1 -> 2024.2)

Writing lock file

Outdated dependencies before PR:

alabaster                  (!) 0.7.16             1.0.0              
astropy                    (!) 6.0.1              6.1.3              
astropy-iers-data          (!) 0.2024.9.2.0.33.23 0.2024.9.16.0.32.21
cellpose                   (!) 2.2.3              3.0.11             
dask                           2024.8.0           2024.9.0           
docstring-parser               0.15               0.16               
executing                  (!) 0.10.0             2.1.0              
filelock                       3.13.4             3.16.0             
idna                       (!) 3.8                3.10               
imageio-ffmpeg             (!) 0.4.9              0.5.1              
importlib-metadata             8.4.0              8.5.0              
ipython                    (!) 8.18.1             8.27.0             
lxml                           4.9.4              5.3.0              
napari-skimage-regionprops (!) 0.8.2              0.10.1             
networkx                   (!) 3.2.1              3.3                
numcodecs                      0.12.1             0.13.0             
numpy                          1.26.4             2.1.1              
nvidia-cublas-cu11         (!) 11.10.3.66         11.11.3.6          
nvidia-cuda-cupti-cu11     (!) 11.7.101           11.8.87            
nvidia-cuda-nvrtc-cu11     (!) 11.7.99            11.8.89            
nvidia-cuda-runtime-cu11   (!) 11.7.99            11.8.89            
nvidia-cudnn-cu11          (!) 8.5.0.96           9.4.0.58           
nvidia-curand-cu11         (!) 10.2.10.91         10.3.0.86          
nvidia-cusolver-cu11       (!) 11.4.0.1           11.4.1.48          
nvidia-cusparse-cu11       (!) 11.7.4.91          11.7.5.86          
nvidia-nccl-cu11           (!) 2.14.3             2.21.5             
nvidia-nvtx-cu11           (!) 11.7.91            11.8.86            
pandas                         1.5.3              2.2.2              
platformdirs               (!) 4.3.2              4.3.3              
pooch                      (!) 1.8.0              1.8.2              
pydantic                       2.8.2              2.9.1              
pydantic-core                  2.20.1             2.23.4             
pytest                     (!) 7.4.4              8.3.3              
pytz                           2024.1             2024.2             
rich                       (!) 13.8.0             13.8.1             
roifile                    (!) 2024.5.24          2024.9.15          
scipy                          1.13.1             1.14.1             
setuptools                     74.1.2             75.1.0             
sphinx                     (!) 7.4.7              8.0.2              
stack-data                 (!) 0.5.1              0.6.3              
stackview                  (!) 0.8.2              0.11.0             
torch                      (!) 2.0.0              2.4.1              
triton                     (!) 2.0.0              3.0.0              
urllib3                    (!) 2.2.2              2.2.3              
zarr                           2.18.2             2.18.3             
zipp                           3.20.1             3.20.2             

Outdated dependencies after PR:

alabaster                  (!) 0.7.16     1.0.0     A light, configurable Sp...
astropy                    (!) 6.0.1      6.1.3     Astronomy and astrophysi...
cellpose                   (!) 2.2.3      3.0.11    anatomical segmentation ...
dask                           2024.8.0   2024.9.0  Parallel PyData with Tas...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.1.0     Get the currently execut...
filelock                       3.13.4     3.16.0    A platform independent f...
imageio-ffmpeg             (!) 0.4.9      0.5.1     FFMPEG wrapper for Python
ipython                    (!) 8.18.1     8.27.0    IPython: Productive Inte...
lxml                           4.9.4      5.3.0     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
numcodecs                      0.12.1     0.13.0    A Python package providi...
numpy                          1.26.4     2.1.1     Fundamental package for ...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.4.0.58  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pooch                      (!) 1.8.0      1.8.2     "Pooch manages your Pyth...
pydantic                       2.8.2      2.9.1     Data validation using Py...
pydantic-core                  2.20.1     2.23.4    Core functionality for P...
pytest                     (!) 7.4.4      8.3.3     pytest: simple powerful ...
scipy                          1.13.1     1.14.1    Fundamental algorithms f...
sphinx                     (!) 7.4.7      8.0.2     Python documentation gen...
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
stackview                  (!) 0.8.2      0.11.0    Interactive image stack ...
torch                      (!) 2.0.0      2.4.1     Tensors and Dynamic neur...
triton                     (!) 2.0.0      3.0.0     A language and compiler ...
zarr                           2.18.2     2.18.3    An implementation of chu...

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

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Coverage report

This PR does not seem to contain any modification to coverable code.

@tcompa tcompa marked this pull request as ready for review September 17, 2024 09:27
@tcompa tcompa merged commit 9ed4ee7 into main Sep 17, 2024
19 checks passed
@tcompa tcompa deleted the poetry-update branch September 17, 2024 09:28
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