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Missing downloads, sha256sum, broken URLs #213

Merged
merged 55 commits into from
Jan 25, 2016
Merged

Missing downloads, sha256sum, broken URLs #213

merged 55 commits into from
Jan 25, 2016

Commits on Jul 13, 2015

  1. Use SSL if possible

    @yhoogstrate
    yhoogstrate committed Jul 13, 2015
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  2. Reverted corrections and reverted urls that return empty files at bot… 

    …h http and https
    @yhoogstrate
    yhoogstrate committed Jul 13, 2015
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Commits on Jul 17, 2015

  1. Apply sha256sums everywhere 

    Additionally whitespace changes were applied unintentionally
thanks to python/xml.etree
    Eric Rasche committed Jul 17, 2015
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  2. Closes #208 

    Merged in @yhoogstrate's work
    Eric Rasche committed Jul 17, 2015
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  3. Correct attribute name according to galaxyproject/galaxy#444

    Eric Rasche committed Jul 17, 2015
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  4. Fix broken merge commit

    Eric Rasche committed Jul 17, 2015
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  5. Correct sha256sums and SF download URLs, they MUST be http

    Eric Rasche committed Jul 17, 2015
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  6. Add sums for remaining files

    Eric Rasche committed Jul 17, 2015
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Commits on Nov 19, 2015

  1. Progress rebasing with new depot urls

    @hexylena
    hexylena committed Nov 19, 2015
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  2. Updated for reversions

    @hexylena
    hexylena committed Nov 19, 2015
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  3. More updates for reversions

    @hexylena
    hexylena committed Nov 19, 2015
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  4. Only a couple of changes for this rebase

    @hexylena
    hexylena committed Nov 19, 2015
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  5. More rebase progress

    @hexylena
    hexylena committed Nov 19, 2015
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  6. More rebase progress

    @hexylena
    hexylena committed Nov 19, 2015
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  7. More rebase progress

    @hexylena
    hexylena committed Nov 19, 2015
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  8. More rebase progress

    @hexylena
    hexylena committed Nov 19, 2015
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  9. Merge in upstream

    @hexylena
    hexylena committed Nov 19, 2015
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  10. Update to CPC urls

    @hexylena
    hexylena committed Nov 19, 2015
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  11. Update some known urls

    @hexylena
    hexylena committed Nov 19, 2015
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  12. Cleanup last files

    @hexylena
    hexylena committed Nov 19, 2015
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Commits on Nov 29, 2015

  1. # This is a combination of 2 commits. 

    # The first commit's message is:

Rebase against master with some manual corrections

# This is the 2nd commit message:

Updated for reversions
    @hexylena
    hexylena committed Nov 29, 2015
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  2. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  3. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  4. # This is a combination of 2 commits. 

    # The first commit's message is:

Rebase against master with some manual corrections

# This is the 2nd commit message:

More rebase progress
    @hexylena
    hexylena committed Nov 29, 2015
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  5. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  6. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  7. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  8. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  9. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  10. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  11. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  12. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  13. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  14. Rebase against master with some manual corrections

    @hexylena
    hexylena committed Nov 29, 2015
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  15. Correct some attributes

    @hexylena
    hexylena committed Nov 29, 2015
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  16. Correct all CPC urls to new style

    @hexylena
    hexylena committed Nov 29, 2015
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  17. Correct accidentally remove xml stanzas

    @hexylena
    hexylena committed Nov 29, 2015
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  18. Merge in master's changes

    @hexylena
    hexylena committed Nov 29, 2015
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  19. Correct some bad file extensions

    @hexylena
    hexylena committed Nov 29, 2015
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  20. Correct remaining extensions

    @hexylena
    hexylena committed Nov 29, 2015
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  21. Penultimate round of url changes, removed extranoues attributes

    @hexylena
    hexylena committed Nov 29, 2015
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  22. Last URL converted to depot

    @hexylena
    hexylena committed Nov 29, 2015
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  23. Move bowtie, anaconda to CPC

    @hexylena
    hexylena committed Nov 29, 2015
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  24. Remove dead code

    @hexylena
    hexylena committed Nov 29, 2015
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  25. Correct eigen, remove useless command

    @hexylena
    hexylena committed Nov 29, 2015
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  26. Ensure recipes are correct against new filenames

    @hexylena
    hexylena committed Nov 29, 2015
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  27. A few more URLs

    @hexylena
    hexylena committed Nov 29, 2015
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  28. Correct missing action close tag

    @hexylena
    hexylena committed Nov 29, 2015
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Commits on Dec 11, 2015

  1. Swap for non-git version of fido

    @hexylena
    hexylena committed Dec 11, 2015
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Commits on Dec 12, 2015

  1. Resolve conflicts against master by merging master in 

    This is uglier than a rebase, but a LOT simpler
    @hexylena
    hexylena committed Dec 12, 2015
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Commits on Dec 16, 2015

  1. Merge master in

    @hexylena
    hexylena committed Dec 16, 2015
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Commits on Jan 8, 2016

  1. Import changes from master 

    Really sorry not to be rebasing these but you have to
work through the entire history, picking out the correct
changes each time, it's an absolute nightmare :(
    @hexylena
    hexylena committed Jan 8, 2016
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  2. Missed one file somehow

    @hexylena
    hexylena committed Jan 8, 2016
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Commits on Jan 25, 2016

  1. Merge in master

    @hexylena
    hexylena committed Jan 25, 2016
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  2. Merge in corrected url

    @hexylena
    hexylena committed Jan 25, 2016
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