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Updating minimap2 to latest version and adding a new preset option #6937

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Updating minimap2 to latest version and adding a new preset option #6937

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@SaimMomin12 SaimMomin12 commented Apr 25, 2025 •
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FOR CONTRIBUTOR:

  • I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
  • License permits unrestricted use (educational + commercial)
  • This PR adds a new tool or tool collection
  • This PR updates an existing tool or tool collection
  • This PR does something else (explain below)

This PR add a new preset option for short read splice alignment to minimap2.

Closes: #6928

@SaimMomin12 SaimMomin12 requested a review from bgruening April 25, 2025 09:04
@SaimMomin12 SaimMomin12 marked this pull request as draft April 25, 2025 13:05
@bernt-matthias bernt-matthias mentioned this pull request Oct 29, 2025
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@bgruening bgruening Awaiting requested review from bgruening

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