Obsoleted 10 terms; #28506

[raymond91125]

No description provided.

[github-actions]

Here's a diff of how these changes impact the classified ontology:

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/go.owl
• Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-12-06/go.owl
• Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/go.owl
• Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-12-06/go.owl
• Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl

Ontology imports

Ontology annotations

flavonoid glucuronidation http://purl.obolibrary.org/obo/GO_0052696

Removed

• flavonoid glucuronidation SubClassOf obsolete cellular glucuronidation

obsolete acyl deglucuronidation http://purl.obolibrary.org/obo/GO_0036235

Removed

• obsolete acyl deglucuronidation definition "The removal of glucuronic acid from an acyl-glucuronide."

  • database_cross_reference "PMID:22294686"

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "GOC:vk"

• obsolete acyl deglucuronidation label "acyl deglucuronidation"

• obsolete acyl deglucuronidation SubClassOf obsolete deglucuronidation

Added

• obsolete acyl deglucuronidation label "obsolete acyl deglucuronidation"

• obsolete acyl deglucuronidation deprecated true

• obsolete acyl deglucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete acyl deglucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• obsolete acyl deglucuronidation definition "OBSOLETE. The removal of glucuronic acid from an acyl-glucuronide."

  • database_cross_reference "PMID:22294686"

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "GOC:vk"

obsolete acyl glucuronidation http://purl.obolibrary.org/obo/GO_0036236

Removed

• obsolete acyl glucuronidation definition "The modification of an substrate by the conjugation of glucuronic acid to form an acyl-glucuronide (also called an acyl-glucuronoside)."

  • database_cross_reference "PMID:22294686"

  • database_cross_reference "PMID:12485951"

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "GOC:vk"

• obsolete acyl glucuronidation label "acyl glucuronidation"

• obsolete acyl glucuronidation SubClassOf obsolete cellular glucuronidation

Added

• obsolete acyl glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• obsolete acyl glucuronidation deprecated true

• obsolete acyl glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete acyl glucuronidation label "obsolete acyl glucuronidation"

• obsolete acyl glucuronidation definition "OBSOLETE. The modification of an substrate by the conjugation of glucuronic acid to form an acyl-glucuronide (also called an acyl-glucuronoside)."

  • database_cross_reference "PMID:22294686"

  • database_cross_reference "PMID:12485951"

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "GOC:vk"

obsolete cellular glucuronidation http://purl.obolibrary.org/obo/GO_0052695

Removed

• obsolete cellular glucuronidation label "cellular glucuronidation"

• obsolete cellular glucuronidation definition "The modification of an organic chemical by the conjugation of glucuronic acid. The substances resulting from glucuronidation are known as glucuronosides (or glucuronides) and are often much more water-soluble than the non-glucuronic acid-containing precursor."

  • database_cross_reference "GOC:BHF"

• obsolete cellular glucuronidation SubClassOf glucuronate metabolic process

Added

• obsolete cellular glucuronidation label "obsolete cellular glucuronidation"

• obsolete cellular glucuronidation deprecated true

• obsolete cellular glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete cellular glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• obsolete cellular glucuronidation definition "OBSOLETE. The modification of an organic chemical by the conjugation of glucuronic acid. The substances resulting from glucuronidation are known as glucuronosides (or glucuronides) and are often much more water-soluble than the non-glucuronic acid-containing precursor."

  • database_cross_reference "GOC:BHF"

obsolete deglucuronidation http://purl.obolibrary.org/obo/GO_0036234

Removed

• obsolete deglucuronidation label "deglucuronidation"

• obsolete deglucuronidation definition "The removal of glucuronic acid from a conjugated substrate."

  • database_cross_reference "PMID:22294686"

  • database_cross_reference "PMID:8560473"

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "GOC:vk"

• obsolete deglucuronidation SubClassOf glucuronate metabolic process

Added

• obsolete deglucuronidation deprecated true

• obsolete deglucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete deglucuronidation label "obsolete deglucuronidation"

• obsolete deglucuronidation definition "OBSOLETE. The removal of glucuronic acid from a conjugated substrate."

  • database_cross_reference "PMID:22294686"

  • database_cross_reference "PMID:8560473"

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "GOC:vk"

• obsolete deglucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

obsolete negative regulation of cellular glucuronidation http://purl.obolibrary.org/obo/GO_2001030

Removed

• obsolete negative regulation of cellular glucuronidation label "negative regulation of cellular glucuronidation"

• obsolete negative regulation of cellular glucuronidation definition "Any process that stops, prevents or reduces the frequency, rate or extent of cellular glucuronidation."

  • database_cross_reference "GOC:BHF"

• obsolete negative regulation of cellular glucuronidation EquivalentTo biological regulation and (negatively regulates some obsolete cellular glucuronidation)

• obsolete negative regulation of cellular glucuronidation SubClassOf negative regulation of small molecule metabolic process

• obsolete negative regulation of cellular glucuronidation SubClassOf obsolete regulation of cellular glucuronidation

• obsolete negative regulation of cellular glucuronidation SubClassOf negative regulation of carbohydrate metabolic process

• obsolete negative regulation of cellular glucuronidation SubClassOf negatively regulates some obsolete cellular glucuronidation

Added

• obsolete negative regulation of cellular glucuronidation definition "OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular glucuronidation."

  • database_cross_reference "GOC:BHF"

• obsolete negative regulation of cellular glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• obsolete negative regulation of cellular glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete negative regulation of cellular glucuronidation deprecated true

• obsolete negative regulation of cellular glucuronidation label "obsolete negative regulation of cellular glucuronidation"

obsolete positive regulation of cellular glucuronidation http://purl.obolibrary.org/obo/GO_2001031

Removed

• obsolete positive regulation of cellular glucuronidation definition "Any process that activates or increases the frequency, rate or extent of cellular glucuronidation."

  • database_cross_reference "GOC:BHF"

• obsolete positive regulation of cellular glucuronidation label "positive regulation of cellular glucuronidation"

• obsolete positive regulation of cellular glucuronidation EquivalentTo biological regulation and (positively regulates some obsolete cellular glucuronidation)

• obsolete positive regulation of cellular glucuronidation SubClassOf positive regulation of small molecule metabolic process

• obsolete positive regulation of cellular glucuronidation SubClassOf positive regulation of carbohydrate metabolic process

• obsolete positive regulation of cellular glucuronidation SubClassOf obsolete regulation of cellular glucuronidation

• obsolete positive regulation of cellular glucuronidation SubClassOf positively regulates some obsolete cellular glucuronidation

Added

• obsolete positive regulation of cellular glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete positive regulation of cellular glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• obsolete positive regulation of cellular glucuronidation deprecated true

• obsolete positive regulation of cellular glucuronidation label "obsolete positive regulation of cellular glucuronidation"

• obsolete positive regulation of cellular glucuronidation definition "OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular glucuronidation."

  • database_cross_reference "GOC:BHF"

obsolete protein O-glucuronidation http://purl.obolibrary.org/obo/GO_0018412

Removed

• obsolete protein O-glucuronidation definition "The modification of a protein by glucuronidation on an amino acid oxygen atom."

  • database_cross_reference "GOC:mah"

• obsolete protein O-glucuronidation label "protein O-glucuronidation"

• obsolete protein O-glucuronidation in_subset gocheck_obsoletion_candidate

• obsolete protein O-glucuronidation SubClassOf obsolete protein glucuronidation

Added

• obsolete protein O-glucuronidation label "obsolete protein O-glucuronidation"

• obsolete protein O-glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• obsolete protein O-glucuronidation deprecated true

• obsolete protein O-glucuronidation definition "OBSOLETE. The modification of a protein by glucuronidation on an amino acid oxygen atom."

  • database_cross_reference "GOC:mah"

• obsolete protein O-glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

obsolete protein glucuronidation http://purl.obolibrary.org/obo/GO_0018411

Removed

• obsolete protein glucuronidation label "protein glucuronidation"

• obsolete protein glucuronidation in_subset gocheck_obsoletion_candidate

• obsolete protein glucuronidation definition "The modification of a protein by amino acid glucuronidation."

  • database_cross_reference "GOC:ai"

• obsolete protein glucuronidation SubClassOf protein modification process

Added

• obsolete protein glucuronidation definition "OBSOLETE. The modification of a protein by amino acid glucuronidation."

  • database_cross_reference "GOC:ai"

• obsolete protein glucuronidation deprecated true

• obsolete protein glucuronidation label "obsolete protein glucuronidation"

• obsolete protein glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete protein glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

obsolete regulation of cellular glucuronidation http://purl.obolibrary.org/obo/GO_2001029

Removed

• obsolete regulation of cellular glucuronidation label "regulation of cellular glucuronidation"

• obsolete regulation of cellular glucuronidation definition "Any process that modulates the frequency, rate or extent of cellular glucuronidation."

  • database_cross_reference "GOC:BHF"

• obsolete regulation of cellular glucuronidation EquivalentTo biological regulation and (regulates some obsolete cellular glucuronidation)

• obsolete regulation of cellular glucuronidation SubClassOf regulation of carbohydrate metabolic process

• obsolete regulation of cellular glucuronidation SubClassOf regulates some obsolete cellular glucuronidation

• obsolete regulation of cellular glucuronidation SubClassOf regulation of ketone metabolic process

• obsolete regulation of cellular glucuronidation SubClassOf regulation of small molecule metabolic process

Added

• obsolete regulation of cellular glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)

• obsolete regulation of cellular glucuronidation definition "OBSOLETE. Any process that modulates the frequency, rate or extent of cellular glucuronidation."

  • database_cross_reference "GOC:BHF"

• obsolete regulation of cellular glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete regulation of cellular glucuronidation label "obsolete regulation of cellular glucuronidation"

• obsolete regulation of cellular glucuronidation deprecated true

obsolete xenobiotic glucuronidation http://purl.obolibrary.org/obo/GO_0052697

Removed

• obsolete xenobiotic glucuronidation definition "The modification of a xenobiotic substance by the conjugation of glucuronic acid. The resultant glucuronosides are often much more water-soluble than the xenobiotic precursor, enabling efficient excretion."

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "PMID:20056724"

• obsolete xenobiotic glucuronidation label "xenobiotic glucuronidation"

• obsolete xenobiotic glucuronidation SubClassOf xenobiotic metabolic process

• obsolete xenobiotic glucuronidation SubClassOf obsolete cellular glucuronidation

Added

• obsolete xenobiotic glucuronidation definition "OBSOLETE. The modification of a xenobiotic substance by the conjugation of glucuronic acid. The resultant glucuronosides are often much more water-soluble than the xenobiotic precursor, enabling efficient excretion."

  • database_cross_reference "GOC:BHF"

  • database_cross_reference "PMID:20056724"

• obsolete xenobiotic glucuronidation label "obsolete xenobiotic glucuronidation"

• obsolete xenobiotic glucuronidation comment "The reason for obsoletion is that the term represents a molecular function."

• obsolete xenobiotic glucuronidation deprecated true

• obsolete xenobiotic glucuronidation term tracker item "https://github.com/geneontology/go-ontology/issues/28506"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)