Enable safe-input tool tracking for Daily Performance Summary workflow

[Copilot]

The Daily Performance Summary workflow imports safe-input GitHub query tools but the MCP extraction layer didn't recognize them, causing gh aw mcp list to miss the safeinputs server and potentially triggering missing-tool errors at runtime.

Changes

Parser enhancement (pkg/parser/mcp.go):

• Extended ExtractMCPConfigurations() to detect safe-inputs frontmatter section
• Registers safe-inputs as HTTP MCP server with proper tool tracking

Workflow declaration (.github/workflows/daily-performance-summary.md):

• Added explicit safe-inputs: section with three GitHub query tools
• Each tool includes shell script implementation with jq filtering

Result

# Before
$ gh aw mcp list | grep daily-performance-summary
2 server(s): safeoutputs, github

# After  
$ gh aw mcp list | grep daily-performance-summary
3 server(s): safeoutputs, safeinputs, github

The workflow now properly exposes github-pr-query, github-issue-query, and github-discussion-query for metrics collection.

Original prompt

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This section details on the original issue you should resolve

<issue_title>[deep-report] Enable safe-input GitHub query tools for Daily Project Performance Summary</issue_title>
<issue_description>### Description
The Daily Project Performance Summary workflow reports missing safe-input GitHub query tools, preventing it from collecting PR/issue/discussion metrics. Add the required safe-input tools (github-pr-query, github-issue-query, github-discussion-query) to the workflow/tool config so the workflow can execute without missing-tool errors.

Expected Impact

Restores full metrics coverage in the performance summary workflow and eliminates the recurring missing-tool warning.

Suggested Agent

Workflow Health Manager or a config-focused agent

Estimated Effort

Quick (< 1 hour)

Data Source

DeepReport Intelligence Briefing - 2026-01-21 (discussion #10941)

AI generated by DeepReport - Intelligence Gathering Agent

Comments on the Issue (you are @copilot in this section)

• Fixes [deep-report] Enable safe-input GitHub query tools for Daily Project Performance Summary #11006

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