Automation branch

[icaoberg]

This branch also fixes issues we are experiencing because of changes in metadata.

Latest bug:

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| Processing dataset with HuBMAP ID HBM376.FRWD.797 |
+---------------------------------------------------+
Failed to process dataset HBM376.FRWD.797.
Traceback (most recent call last):
  File "/jet/home/icaoberg/code/miniconda3/envs/submission/lib/python3.10/site-packages/hubmapbags/magic.py", line 1261, in create_big_data_bags
    do_it(
  File "/jet/home/icaoberg/code/miniconda3/envs/submission/lib/python3.10/site-packages/hubmapbags/magic.py", line 770, in do_it
    datasets = __extract_datasets_from_input(input, token=token, instance=instance)
  File "/jet/home/icaoberg/code/miniconda3/envs/submission/lib/python3.10/site-packages/hubmapbags/magic.py", line 284, in __extract_datasets_from_input
    datasets = __extract_dataset_info_from_db(input, token=token, instance=instance)
  File "/jet/home/icaoberg/code/miniconda3/envs/submission/lib/python3.10/site-packages/hubmapbags/magic.py", line 146, in __extract_dataset_info_from_db
    organ_type = j.get("organ_type")[0]
TypeError: 'NoneType' object is not subscriptable

[icaoberg]

Fixed some minor issues.