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@ibest

Institute for Bioinformatics and Evolutionary Studies

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  1. ARC ARC Public

    Assembly by Reduced Complexity (ARC)

    Python 41 5

  2. seqyclean seqyclean Public

    C++ 26 2

  3. Seed Seed Public

    R/Shiny application for viewing microbial community data

    R 19 9

  4. GRC_Scripts GRC_Scripts Public

    Executable R and Python scripts for the Genomics Resources Core

    R 8 2

  5. SAD-BCB501-Spring2018 SAD-BCB501-Spring2018 Public

    Analysis of various datasets for the Sequence Analysis Discussion group.

    4

  6. HTStream HTStream Public

    Forked from s4hts/HTStream

    A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes

    C++ 3

Repositories

Showing 10 of 20 repositories
  • clearcut Public Forked from sheneman/clearcut

    This is clearcut, the reference implementation for the Relaxed Neighbor Joining algorithm.

    ibest/clearcut’s past year of commit activity
    C 2 3 0 0 Updated Oct 13, 2021
  • Seed Public

    R/Shiny application for viewing microbial community data

    ibest/Seed’s past year of commit activity
    R 19 9 6 0 Updated Dec 17, 2020
  • HTStream Public Forked from s4hts/HTStream

    A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes

    ibest/HTStream’s past year of commit activity
    C++ 3 Apache-2.0 9 0 0 Updated May 31, 2020
  • seqyclean Public
    ibest/seqyclean’s past year of commit activity
    C++ 26 MIT 2 4 1 Updated Oct 17, 2018
  • dbcHelpers Public

    Helper tools for pre and post dbcAmplicon runs.

    ibest/dbcHelpers’s past year of commit activity
    Python 0 0 0 0 Updated Oct 12, 2018
  • GRC_Scripts Public

    Executable R and Python scripts for the Genomics Resources Core

    ibest/GRC_Scripts’s past year of commit activity
    R 8 Artistic-2.0 2 4 0 Updated May 14, 2018
  • HTStream-validation Public

    Validation and figures for HTStream

    ibest/HTStream-validation’s past year of commit activity
    0 0 0 0 Updated Feb 1, 2018
  • SAD-BCB501-Spring2018 Public

    Analysis of various datasets for the Sequence Analysis Discussion group.

    ibest/SAD-BCB501-Spring2018’s past year of commit activity
    4 0 0 0 Updated Jan 22, 2018
  • MetAmp Public
    ibest/MetAmp’s past year of commit activity
    R 0 0 2 0 Updated Aug 10, 2016
  • ARC Public

    Assembly by Reduced Complexity (ARC)

    ibest/ARC’s past year of commit activity
    Python 41 Apache-2.0 5 14 0 Updated Mar 29, 2016
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