I'm a researcher and developer passionate about computational biology, data science, and high-performance computing. I enjoy building tools and pipelines that make complex data more accessible and meaningful.
- Computational biology & bioinformatics
- Data visualization & interactive dashboards
- High-performance computing (HPC)
- Machine learning for genomics
- Languages: R, Nextflow, Python, JavaScript, Bash
- Frameworks & Tools: Shiny, Plotly, DataTables
- Data Processing: tidyverse, pandas, NumPy
- HPC & Cloud: Slurm, Singularity, Apptainer, Docker
Here are a few things I've been working on:
- PanRank – A phenotype-based gene prioritization tool using machine learning.
- TBtypeR - An R package for ultra-sensitive detection of mixed tuberculosis infections for NGS data
- published here: https://www.nature.com/articles/s42003-025-07705-9
- PLASTER – A pipeline for accurate genotyping of complex CYP2D6 alleles and pharmocogenic interpretation
- published here: https://www.nature.com/articles/s42003-022-03102-8
- GitHub: @jemunro
- Bluesky: @jemunro.bsky.social