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Qa issue #9

Merged
merged 230 commits into from
Sep 14, 2022
Merged

Qa issue #9

merged 230 commits into from
Sep 14, 2022

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lbdreyer
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🚀 Pull Request

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Consult Iris pull request check list

lbdreyer and others added 30 commits January 31, 2022 17:23
* reset whats new

* Specify minor in whats new
Co-authored-by: Lockfile bot <noreply@github.com>
* New tool-agnostic ASV env management.

* Benchmarking only build the latest Python.

* Increase benchmark accuracy by increasing rounds.

* Fix ASV rounds mistake.

* ASV clearer use of _interpolate_commands.
)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 3.8.2 to 3.12.1.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@052fc72...f22a7da)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [actions/stale](https://github.com/actions/stale) from 4.0.0 to 4.1.0.
- [Release notes](https://github.com/actions/stale/releases)
- [Changelog](https://github.com/actions/stale/blob/main/CHANGELOG.md)
- [Commits](actions/stale@v4.0.0...v4.1.0)

---
updated-dependencies:
- dependency-name: actions/stale
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* New tool-agnostic ASV env management.

* Benchmarking only build the latest Python.

* Increase benchmark accuracy by increasing rounds.

* Fix ASV rounds mistake.

* ASV clearer use of _interpolate_commands.
* Fix opendap bug, add docs and extra testing

* Add whats new entry

* Update docs/src/whatsnew/3.2.rst

Co-authored-by: Bill Little <bill.little@metoffice.gov.uk>

* Add warning box

Co-authored-by: Bill Little <bill.little@metoffice.gov.uk>
* Synthetic FF PP NetCDF and loading benchmarks.
* [pre-commit.ci] pre-commit autoupdate

updates:
- [github.com/psf/black: 21.12b0 → 22.1.0](psf/black@21.12b0...22.1.0)
- [github.com/asottile/blacken-docs: v1.12.0 → v1.12.1](adamchainz/blacken-docs@v1.12.0...v1.12.1)
- [github.com/aio-libs/sort-all: v1.1.0 → v1.2.0](aio-libs/sort-all@v1.1.0...v1.2.0)

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* fix trove classifier (SciTools#4324)

* update version to 3.2. post release

Co-authored-by: Bill Little <bill.james.little@gmail.com>
Bumps [actions/script](https://github.com/actions/script) from 5.1.0 to 6.
- [Release notes](https://github.com/actions/script/releases)
- [Commits](actions/github-script@v5.1.0...v6)

---
updated-dependencies:
- dependency-name: actions/script
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Yaml fixes + clarifications.

* Update .github/workflows/stale.yml

Co-authored-by: Ruth Comer <10599679+rcomer@users.noreply.github.com>

Co-authored-by: Bill Little <bill.little@metoffice.gov.uk>
Co-authored-by: Ruth Comer <10599679+rcomer@users.noreply.github.com>
* Utility class in netcdf loader should not be public.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Rename container for better clarity.

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* stop using CalendarDateTime

* update dependencies

* stronger tests for _fixup_dates

* add whatsnew
…4607)

Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 3.12.1 to 3.13.0.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@f22a7da...89265e8)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
…ted data (SciTools#4524)

* Add extra pieces to get false easting and northing

* tests

* Add extra test file ref and cml

* lib/iris/tests/results/netcdf/netcdf_merc_false.cml

* Update cml for new test data

* Bump test data version for cirrus

* What's new
pp-mo and others added 29 commits August 18, 2022 10:44
* Minor What's New fixes.

* Missing space.
* update whatsnew

* fix index

* remove template

* address review comments
Co-authored-by: Lockfile bot <noreply@github.com>
* reset whatsnew

* remove bugfix section

* address review comments
Bumps [peter-evans/create-pull-request](https://github.com/peter-evans/create-pull-request) from 4.0.4 to 4.1.1.
- [Release notes](https://github.com/peter-evans/create-pull-request/releases)
- [Commits](peter-evans/create-pull-request@923ad83...18f9043)

---
updated-dependencies:
- dependency-name: peter-evans/create-pull-request
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Draft: Tilde's and wildcard can now be read by iris.save. Modifications and tests provisionally done, docstrings still need editing, with examples and doctests needing being added/editing.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Docstrings updated for expand_filespecs and save

* docstrings for save and expand_filespecs updated to numpy formatting

* Reviewed: Added expansion and relative path tests to expand_filespecs. Ensured list indexing returns single item lists. Minor comment changes.

* Updated latest What's New, and added ESadek-MO to common links

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fixed isort conflicts

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* unpin shapely

* update whatsnew
* COUNT

* SUM

* tidy up

* increase dask min pin

* fix returned weights when masked

* typo

* docstrings

* whatsnew

* include reviewer in whatsnew
* remove IrisTest.setUpClass

* whatsnew
* Use setuptools_scm release-branch-semver version_scheme.

* Properly handle all possible scm-rtd combinations.

* What's new entry.

* Use git stash to protect setuptools_scm from RTD.

* Better version badges.

* Better use of git stash.

* Substitute commit SHAs in place of versions where appropriate.

* Make rtd_version safe for use in shields.io badges.

* Make rtd_version safe for use in shields.io badges.
* v3.3.x:
  Better handle `setuptools_scm` versioning (SciTools#4926)
  Unpin shapely (SciTools#4925)

# Conflicts:
#	requirements/ci/nox.lock/py310-linux-64.lock
#	requirements/ci/nox.lock/py38-linux-64.lock
#	requirements/ci/nox.lock/py39-linux-64.lock
* Allowed collapsing over coordinates with nbounds!=0,2

* Simplified test

* Added further tests for other warnings

* pre-commit

* Used unittest's assertWarnsRegex

* Added What's new? entry
Co-authored-by: Lockfile bot <noreply@github.com>
* v3.3.x:
  update whatsnew title for v3.3 release (SciTools#4939)
  fix whatsnew (SciTools#4932)
…ols#4935)

* Added zonal mean gallery example, continued from @TTV-Intrepid

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Added TTVIntrepid to common links for What's New functionality

* Fixed zonal mean plotting, add axh

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Minor visual changes, ax3 plotting fix, removed warning suppression.

* updated imagerepo for zonal means

* updated ci-tests yml to latest iris test data version

* updated what's new

* updated announcements to one line

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
updates:
- [github.com/psf/black: 22.6.0 → 22.8.0](psf/black@22.6.0...22.8.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
* Remove deprecated 'python setup.py test' support

* add whatsnew entry
* fix setup.py std_names building

* refactor
* Fix cube repr for scalar anc_var and cell measures

* Add whatsnew

* Fix cube summary tests

* Review actions: reword whats new, reorder scalar sections in cube printout

* Fix cube summary test, update whatsnew

* Fix code comment
@lbdreyer lbdreyer merged commit edd6c33 into main Sep 14, 2022
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