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Log errors in Server.Transport.StdIO. (#684)
* Log errors in `Server.Transport.StdIO`. * Added error log in read loop. * Improved error values in header and body parsing. * format files * Stop server when stdio receives `:eof`, and log message. * Replace `String.to_integer/1` with `Integer.parse/1` to prevent crashes in `StdIO`. * Also fix redundant clause in with expression per credo.
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