Don't read full cube into mem for histogramming #191
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samcunliffe
approved these changes
Jul 26, 2023
src/napari_matplotlib/histogram.py
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| @@ -33,14 +33,21 @@ def draw(self) -> None: | |||
| Clear the axes and histogram the currently selected layer/slice. | |||
| """ | |||
| layer = self.layers[0] | |||
| bins = np.linspace(np.min(layer.data), np.max(layer.data), 100) | |||
| print(layer.data.shape) | |||
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Debug output? To be removed?
src/napari_matplotlib/histogram.py
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| # Important to calculate bins after slicing 3D data, to avoid reading | ||
| # whole cube into memory. | ||
| bins = np.linspace(np.min(data), np.max(data), 100) | ||
| print(bins) |
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Suggested change
| print(bins) |
Ditto.
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Fixes #187