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a repository for the analysis of C9 and C19 dms data

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CYP multidms analysis

Comparing DMS datasets for CYP2C19 and CYP2C19 using multidms.

Key files:

  • notebooks/09-20-23-Analysis.ipynb provides the code and description for model fitting as described in the manuscript.
  • data/ holds two csv files containing the barcode-level variant abundance scores for CYP2C19and CYP2C9. These comprise the input to the analysis notebook.
  • results/replicate_shift_lasso_sweep.csv contains the fit parameters for all 14 models tested (2 replicate training sets, 7 lasso coefficient strengths).

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a repository for the analysis of C9 and C19 dms data

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