Resolve z-score discrepancy due to beads samples ordering (#189) #111

	name: docs_pages_workflow

	# execute this workflow automatically when a we push to master
	on:
	push:
	branches: [ main ]

	jobs:

	build_docs_job:
	runs-on: ubuntu-latest
	# container: debian:buster-slim
	container: debian:buster
	strategy:
	matrix:
	python-version: [3.7]

	steps:

	# - uses: actions/checkout@v3
	# - name: Set up Python ${{ matrix.python-version }}
	# uses: actions/setup-python@v4
	# with:
	# python-version: ${{ matrix.python-version }}
	# - name: Install dependencies
	# run: \|
	# python -m pip install --upgrade pip
	# - name: Install phippery
	# run: \|
	# pip install -e ".[dev]"

	- name: Prereqs
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	run: \|
	apt-get update
	apt-get install -y git python3-pip
	git clone --depth 1 "https://token:${GITHUB_TOKEN}@github.com/${GITHUB_REPOSITORY}.git" .
	git config --global --add safe.directory /__w/phippery/phippery
	shell: bash

	# TODO, do we really need to install phippery?
	# could we just install all the other pre-reqs

	- name: Install phippery
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	run: \|
	python3 -m pip install --upgrade pip
	python3 -m pip install -e ".[dev]"
	shell: bash

	- name: Execute script to build our documentation and update pages
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	run: "docs/buildDocs.sh"
	shell: bash

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