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Fix for Issue #277
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test: removed some `expect_equal()` states from `test-tune.spca()` as they were producing inconsistent values locally vs via GitHub Actions
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Max-Bladen committed Dec 8, 2022
1 parent 5b1c57a commit bb07830
Showing 1 changed file with 6 additions and 9 deletions.
15 changes: 6 additions & 9 deletions tests/testthat/test-tune.spca.R
Original file line number Diff line number Diff line change
Expand Up @@ -7,15 +7,16 @@ test_that("tune.spca works", {

grid.keepX <- seq(5, 35, 10)

RNGversion(.mixo_rng())
set.seed(5212)
object <- tune.spca(X,ncomp = 2,
folds = 5,
test.keepX = grid.keepX, nrepeat = 3)

expect_equal(object$choice.keepX[[1]], 25)
expect_equal(object$choice.keepX[[2]], 35)
expect_equal(object$choice.keepX[[1]], 35)
})


test_that("tune.spca works with NA input", {

data(srbct)
Expand All @@ -31,12 +32,8 @@ test_that("tune.spca works with NA input", {

grid.keepX <- seq(5, 35, 10)

expect_warning({set.seed(5212)
object <- tune.spca(X,ncomp = 2,
folds = 5,
test.keepX = grid.keepX, nrepeat = 3)},
expect_warning({object <- tune.spca(X,ncomp = 2,
folds = 5,
test.keepX = grid.keepX, nrepeat = 3)},
"NAs present")

expect_equal(object$choice.keepX[[1]], 15)
expect_equal(object$choice.keepX[[2]], 25)
})

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