MAINT: Update CIs and bump minimum to 3.8

.github/workflows/unit_tests.yml

@@ -49,7 +49,7 @@ jobs:
       fail-fast: false
       matrix:
         os: [ubuntu-latest]
-        python-version: ["3.7", "3.10"]  # Oldest and newest supported versions
+        python-version: ["3.8", "3.10"]  # Oldest and newest supported versions
     steps:
     - name: Set up Python ${{ matrix.python-version }}
       uses: actions/setup-python@v4
@@ -59,7 +59,7 @@ jobs:
     - uses: actions/cache@v3
       with:
         path: ${{ env.pythonLocation }}
-        key: build-1-${{ env.pythonLocation }}-${{ hashFiles('setup.cfg') }}-${{ hashFiles('test_requirements.txt') }}
+        key: build-2-${{ env.pythonLocation }}-${{ hashFiles('setup.cfg') }}-${{ hashFiles('test_requirements.txt') }}
 
     - name: Install dependencies
       run: |
@@ -113,7 +113,7 @@ jobs:
       fail-fast: false
       matrix:
         os: [ubuntu-20.04, ubuntu-latest, macos-latest, windows-latest]
-        python-version: ["3.7", "3.10"]  # Oldest and newest supported versions
+        python-version: ["3.8", "3.10"]  # Oldest and newest supported versions
         mne-version: [mne-stable]
         bids-validator-version: [validator-stable]
 
@@ -144,23 +144,23 @@ jobs:
       uses: actions/cache@v3
       with:
         path: ${{ env.pythonLocation }}
-        key: test-0-${{ env.pythonLocation }}-${{ hashFiles('setup.cfg') }}-${{ hashFiles('test_requirements.txt') }}
+        key: test-0-${{ env.pythonLocation }}-${{ env.os }}-${{ hashFiles('setup.cfg') }}-${{ hashFiles('test_requirements.txt') }}
 
     - name: Install Python dependencies using pip
       run: |
         python -m pip install --upgrade pip
-        python -m pip install -r test_requirements.txt
+        python -m pip install --upgrade -r test_requirements.txt
 
     - name: Install MNE (stable)
       if: "matrix.mne-version == 'mne-stable'"
       run: |
-        git clone --depth 1 --single-branch --branch maint/1.0 https://github.com/mne-tools/mne-python.git -b maint/1.0
+        git clone --depth 1 --single-branch --branch maint/1.2 https://github.com/mne-tools/mne-python.git
         python -m pip install -e ./mne-python
 
     - name: Install MNE (main)
       if: "matrix.mne-version == 'mne-main'"
       run: |
-        git clone --depth 1 --single-branch --branch main https://github.com/mne-tools/mne-python.git -b main
+        git clone --depth 1 --single-branch --branch main https://github.com/mne-tools/mne-python.git
         python -m pip install -e ./mne-python
 
     - name: Install BIDS validator (stable)

doc/install.rst

@@ -12,22 +12,22 @@ Dependencies
 
 Required:
 
-* ``mne`` (>=1.0)
-* ``numpy`` (>=1.16.0)
-* ``scipy`` (>=1.2.0, or >=1.5.0 for certain operations with EEGLAB data)
+* ``mne`` (>=1.2)
+* ``numpy`` (>=1.18.1)
+* ``scipy`` (>=1.4.1, or >=1.5.0 for certain operations with EEGLAB data)
 * ``setuptools`` (>=46.4.0)
 
 Optional:
 
 * ``nibabel`` (>=2.5, for processing MRI data)
-* ``pybv`` (>=0.7.3, for writing BrainVision data)
-* ``pymatreader`` (>=0.0.29 , for operations with EEGLAB data)
+* ``pybv`` (>=0.7.5, for writing BrainVision data)
+* ``pymatreader`` (>=0.0.30 , for operations with EEGLAB data)
 * ``matplotlib`` (>=3.1.0, for using the interactive data inspector)
-* ``pandas`` (>=0.24.0, for generating event statistics)
+* ``pandas`` (>=1.0.0, for generating event statistics)
 * ``EDFlib-Python`` (>=1.0.6, for writing EDF data)
 
 We recommend the `Anaconda <https://www.anaconda.com/download/>`_ Python distribution.
-We require that you **use Python 3.7 or higher**.
+We require that you **use Python 3.8 or higher**.
 You may choose to install ``mne-bids``
 `via pip <#installation-via-pip>`_ or
 `via conda <#installation-via-conda>`_.

doc/whats_new.rst

@@ -54,7 +54,8 @@ Detailed list of changes
 🛠 Requirements
 ^^^^^^^^^^^^^^^
 
-- ...
+- MNE-BIDS now requires Python 3.8 or higher, because Python 3.7 is soon reaching its end of life.
+- MNE-BIDS now requires MNE-Python 1.2.0 or higher.
 
 🪲 Bug fixes
 ^^^^^^^^^^^^

setup.cfg

@@ -22,7 +22,6 @@ classifiers =
   Operating System :: POSIX :: Linux
   Operating System :: MacOS
   Programming Language :: Python
-  Programming Language :: Python :: 3.7
   Programming Language :: Python :: 3.8
   Programming Language :: Python :: 3.9
   Programming Language :: Python :: 3.10
@@ -32,23 +31,23 @@ project_urls =
   Source = https://github.com/mne-tools/mne-bids
 
 [options]
-python_requires = ~= 3.7
+python_requires = ~= 3.8
 install_requires =
-  mne >= 1.0
-  numpy >= 1.16.0
-  scipy >= 1.2.0
+  mne >= 1.2
+  numpy >= 1.18.1
+  scipy >= 1.4.1
   setuptools
 packages = find:
 include_package_data = True
 
 [options.extras_require]
 full =
   nibabel >= 2.5
-  pybv >= 0.7.3
+  pybv >= 0.7.5
   matplotlib >= 3.1.0
-  pandas >= 0.24.0
+  pandas >= 1.0.0
   EDFlib-Python >= 1.0.6
-  pymatreader >= 0.0.29
+  pymatreader >= 0.0.30
 
 [options.entry_points]
 console_scripts =

test_requirements.txt

@@ -1,13 +1,13 @@
-numpy>=1.16.0
+numpy>=1.18.1
 scipy>=1.5.0
-mne>=1.0
+mne>=1.2
 matplotlib>=3.1
-pandas>=0.24.0
+pandas>=1.0.0
 nibabel>=2.5
-pybv>=0.7.3
+pybv>=0.7.5
 openneuro-py>=2022.2
 EDFlib-Python>=1.0.6
-pymatreader>=0.0.29
+pymatreader>=0.0.30
 pytest
 pytest-cov
 pytest-sugar